Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.94■■□□□ 1.58
CDH23Q9H251 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDH23Q9H251 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDH23Q9H251 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.94■■□□□ 1.58
CDH23Q9H251 AC008764.7-201ENST00000593779 1081 ntBASIC24.94■■□□□ 1.58
CDH23Q9H251 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.93■■□□□ 1.58
CDH23Q9H251 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.93■■□□□ 1.58
CDH23Q9H251 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CDH23Q9H251 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDH23Q9H251 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CDH23Q9H251 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CDH23Q9H251 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CDH23Q9H251 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.93■■□□□ 1.58
CDH23Q9H251 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CDH23Q9H251 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDH23Q9H251 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDH23Q9H251 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDH23Q9H251 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDH23Q9H251 MIR6722-201ENST00000617286 78 ntBASIC24.91■■□□□ 1.58
CDH23Q9H251 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.91■■□□□ 1.58
CDH23Q9H251 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.91■■□□□ 1.58
CDH23Q9H251 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.91■■□□□ 1.58
CDH23Q9H251 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDH23Q9H251 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.91■■□□□ 1.58
CDH23Q9H251 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CDH23Q9H251 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDH23Q9H251 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.9■■□□□ 1.58
CDH23Q9H251 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.9■■□□□ 1.58
CDH23Q9H251 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.9■■□□□ 1.58
CDH23Q9H251 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDH23Q9H251 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.9■■□□□ 1.58
CDH23Q9H251 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.9■■□□□ 1.58
CDH23Q9H251 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDH23Q9H251 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDH23Q9H251 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CDH23Q9H251 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.89■■□□□ 1.58
CDH23Q9H251 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
CDH23Q9H251 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CDH23Q9H251 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC24.89■■□□□ 1.57
CDH23Q9H251 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.89■■□□□ 1.57
CDH23Q9H251 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.89■■□□□ 1.57
CDH23Q9H251 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.88■■□□□ 1.57
CDH23Q9H251 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CDH23Q9H251 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.88■■□□□ 1.57
CDH23Q9H251 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
CDH23Q9H251 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CDH23Q9H251 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDH23Q9H251 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
CDH23Q9H251 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDH23Q9H251 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CDH23Q9H251 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDH23Q9H251 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDH23Q9H251 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CDH23Q9H251 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDH23Q9H251 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.87■■□□□ 1.57
CDH23Q9H251 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.87■■□□□ 1.57
CDH23Q9H251 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.87■■□□□ 1.57
CDH23Q9H251 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDH23Q9H251 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDH23Q9H251 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDH23Q9H251 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.86■■□□□ 1.57
CDH23Q9H251 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDH23Q9H251 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDH23Q9H251 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.86■■□□□ 1.57
CDH23Q9H251 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDH23Q9H251 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDH23Q9H251 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDH23Q9H251 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDH23Q9H251 AC027612.3-201ENST00000413684 1047 ntBASIC24.85■■□□□ 1.57
CDH23Q9H251 AC004448.1-201ENST00000458332 883 ntBASIC24.85■■□□□ 1.57
CDH23Q9H251 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.85■■□□□ 1.57
CDH23Q9H251 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.85■■□□□ 1.57
CDH23Q9H251 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.85■■□□□ 1.57
CDH23Q9H251 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDH23Q9H251 AC233992.3-201ENST00000607491 485 ntBASIC24.85■■□□□ 1.57
CDH23Q9H251 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.84■■□□□ 1.57
CDH23Q9H251 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CDH23Q9H251 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.84■■□□□ 1.57
CDH23Q9H251 AC066615.1-201ENST00000640911 628 ntBASIC24.84■■□□□ 1.57
CDH23Q9H251 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
CDH23Q9H251 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDH23Q9H251 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDH23Q9H251 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDH23Q9H251 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDH23Q9H251 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.84■■□□□ 1.57
CDH23Q9H251 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.84■■□□□ 1.57
CDH23Q9H251 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
CDH23Q9H251 AP004609.3-201ENST00000610705 1884 ntBASIC24.83■■□□□ 1.57
CDH23Q9H251 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
CDH23Q9H251 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.83■■□□□ 1.57
CDH23Q9H251 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CDH23Q9H251 AC136469.2-201ENST00000623944 1028 ntBASIC24.83■■□□□ 1.57
CDH23Q9H251 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.83■■□□□ 1.57
CDH23Q9H251 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
CDH23Q9H251 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDH23Q9H251 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.82■■□□□ 1.56
CDH23Q9H251 AL138724.1-201ENST00000606771 1088 ntBASIC24.82■■□□□ 1.56
CDH23Q9H251 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDH23Q9H251 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
CDH23Q9H251 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms