Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A4EQ96PG1 AL161729.1-201ENST00000604104 1402 ntBASIC21.55■■□□□ 1.04
MS4A4EQ96PG1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.55■■□□□ 1.04
MS4A4EQ96PG1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A4EQ96PG1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A4EQ96PG1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.55■■□□□ 1.04
MS4A4EQ96PG1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.55■■□□□ 1.04
MS4A4EQ96PG1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.55■■□□□ 1.04
MS4A4EQ96PG1 THA1P-201ENST00000590384 1145 ntBASIC21.55■■□□□ 1.04
MS4A4EQ96PG1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A4EQ96PG1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
MS4A4EQ96PG1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
MS4A4EQ96PG1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
MS4A4EQ96PG1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MS4A4EQ96PG1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
MS4A4EQ96PG1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MS4A4EQ96PG1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MS4A4EQ96PG1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.54■■□□□ 1.04
MS4A4EQ96PG1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.54■■□□□ 1.04
MS4A4EQ96PG1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
MS4A4EQ96PG1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MS4A4EQ96PG1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MS4A4EQ96PG1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MS4A4EQ96PG1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
MS4A4EQ96PG1 MIR4508-201ENST00000584178 70 ntBASIC21.54■■□□□ 1.04
MS4A4EQ96PG1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MS4A4EQ96PG1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
MS4A4EQ96PG1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MS4A4EQ96PG1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.54■■□□□ 1.04
MS4A4EQ96PG1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.53■■□□□ 1.04
MS4A4EQ96PG1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MS4A4EQ96PG1 KRT18P24-201ENST00000344739 1156 ntBASIC21.53■■□□□ 1.04
MS4A4EQ96PG1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
MS4A4EQ96PG1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.53■■□□□ 1.04
MS4A4EQ96PG1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.53■■□□□ 1.04
MS4A4EQ96PG1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MS4A4EQ96PG1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MS4A4EQ96PG1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
MS4A4EQ96PG1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MS4A4EQ96PG1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
MS4A4EQ96PG1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.52■■□□□ 1.04
MS4A4EQ96PG1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.52■■□□□ 1.04
MS4A4EQ96PG1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
MS4A4EQ96PG1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.51■■□□□ 1.03
MS4A4EQ96PG1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.51■■□□□ 1.03
MS4A4EQ96PG1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
MS4A4EQ96PG1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MS4A4EQ96PG1 ABCB10P4-201ENST00000566803 2184 ntBASIC21.51■■□□□ 1.03
MS4A4EQ96PG1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
MS4A4EQ96PG1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MS4A4EQ96PG1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MS4A4EQ96PG1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
MS4A4EQ96PG1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MS4A4EQ96PG1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MS4A4EQ96PG1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MS4A4EQ96PG1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.5■■□□□ 1.03
MS4A4EQ96PG1 MIR4281-201ENST00000580852 62 ntBASIC21.5■■□□□ 1.03
MS4A4EQ96PG1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MS4A4EQ96PG1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.5■■□□□ 1.03
MS4A4EQ96PG1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MS4A4EQ96PG1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MS4A4EQ96PG1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MS4A4EQ96PG1 AL022069.1-201ENST00000568025 1636 ntBASIC21.5■■□□□ 1.03
MS4A4EQ96PG1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MS4A4EQ96PG1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
MS4A4EQ96PG1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MS4A4EQ96PG1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
MS4A4EQ96PG1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MS4A4EQ96PG1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.49■■□□□ 1.03
MS4A4EQ96PG1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.49■■□□□ 1.03
MS4A4EQ96PG1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MS4A4EQ96PG1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
MS4A4EQ96PG1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MS4A4EQ96PG1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
MS4A4EQ96PG1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MS4A4EQ96PG1 YBX1P4-201ENST00000392794 808 ntBASIC21.48■■□□□ 1.03
MS4A4EQ96PG1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MS4A4EQ96PG1 KRT8P33-201ENST00000508125 1423 ntBASIC21.47■■□□□ 1.03
MS4A4EQ96PG1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.47■■□□□ 1.03
MS4A4EQ96PG1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.47■■□□□ 1.03
MS4A4EQ96PG1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MS4A4EQ96PG1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
MS4A4EQ96PG1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MS4A4EQ96PG1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.47■■□□□ 1.03
MS4A4EQ96PG1 AC103834.1-201ENST00000520383 144 ntBASIC21.47■■□□□ 1.03
MS4A4EQ96PG1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MS4A4EQ96PG1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.47■■□□□ 1.03
MS4A4EQ96PG1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
MS4A4EQ96PG1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MS4A4EQ96PG1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
MS4A4EQ96PG1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MS4A4EQ96PG1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.46■■□□□ 1.03
MS4A4EQ96PG1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MS4A4EQ96PG1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MS4A4EQ96PG1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MS4A4EQ96PG1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MS4A4EQ96PG1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
MS4A4EQ96PG1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
MS4A4EQ96PG1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MS4A4EQ96PG1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms