Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.41■□□□□ 0.7
TIMD4Q96H15 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.41■□□□□ 0.7
TIMD4Q96H15 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TIMD4Q96H15 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMD4Q96H15 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.4■□□□□ 0.7
TIMD4Q96H15 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.4■□□□□ 0.7
TIMD4Q96H15 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.4■□□□□ 0.7
TIMD4Q96H15 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.4■□□□□ 0.7
TIMD4Q96H15 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
TIMD4Q96H15 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.4■□□□□ 0.7
TIMD4Q96H15 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMD4Q96H15 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.4■□□□□ 0.7
TIMD4Q96H15 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMD4Q96H15 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.4■□□□□ 0.7
TIMD4Q96H15 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.4■□□□□ 0.7
TIMD4Q96H15 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TIMD4Q96H15 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.4■□□□□ 0.7
TIMD4Q96H15 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.39■□□□□ 0.69
TIMD4Q96H15 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TIMD4Q96H15 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TIMD4Q96H15 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TIMD4Q96H15 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TIMD4Q96H15 AC004448.1-201ENST00000458332 883 ntBASIC19.38■□□□□ 0.69
TIMD4Q96H15 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.38■□□□□ 0.69
TIMD4Q96H15 AL117332.1-201ENST00000622628 974 ntBASIC19.38■□□□□ 0.69
TIMD4Q96H15 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TIMD4Q96H15 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMD4Q96H15 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.37■□□□□ 0.69
TIMD4Q96H15 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TIMD4Q96H15 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMD4Q96H15 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.37■□□□□ 0.69
TIMD4Q96H15 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TIMD4Q96H15 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TIMD4Q96H15 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.37■□□□□ 0.69
TIMD4Q96H15 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.37■□□□□ 0.69
TIMD4Q96H15 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.37■□□□□ 0.69
TIMD4Q96H15 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TIMD4Q96H15 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TIMD4Q96H15 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TIMD4Q96H15 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMD4Q96H15 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TIMD4Q96H15 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.36■□□□□ 0.69
TIMD4Q96H15 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TIMD4Q96H15 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.36■□□□□ 0.69
TIMD4Q96H15 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.36■□□□□ 0.69
TIMD4Q96H15 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.36■□□□□ 0.69
TIMD4Q96H15 MIR3621-201ENST00000580529 85 ntBASIC19.36■□□□□ 0.69
TIMD4Q96H15 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TIMD4Q96H15 AL022069.1-201ENST00000568025 1636 ntBASIC19.36■□□□□ 0.69
TIMD4Q96H15 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.35■□□□□ 0.69
TIMD4Q96H15 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMD4Q96H15 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TIMD4Q96H15 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.35■□□□□ 0.69
TIMD4Q96H15 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMD4Q96H15 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMD4Q96H15 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TIMD4Q96H15 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.35■□□□□ 0.69
TIMD4Q96H15 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TIMD4Q96H15 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TIMD4Q96H15 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TIMD4Q96H15 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TIMD4Q96H15 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TIMD4Q96H15 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TIMD4Q96H15 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TIMD4Q96H15 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.34■□□□□ 0.69
TIMD4Q96H15 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.34■□□□□ 0.69
TIMD4Q96H15 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.34■□□□□ 0.69
TIMD4Q96H15 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TIMD4Q96H15 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
TIMD4Q96H15 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.33■□□□□ 0.69
TIMD4Q96H15 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TIMD4Q96H15 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TIMD4Q96H15 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TIMD4Q96H15 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TIMD4Q96H15 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.33■□□□□ 0.68
TIMD4Q96H15 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TIMD4Q96H15 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.32■□□□□ 0.68
TIMD4Q96H15 AC005703.6-201ENST00000623265 1329 ntBASIC19.32■□□□□ 0.68
TIMD4Q96H15 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TIMD4Q96H15 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIMD4Q96H15 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIMD4Q96H15 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.32■□□□□ 0.68
TIMD4Q96H15 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
TIMD4Q96H15 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIMD4Q96H15 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TIMD4Q96H15 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.32■□□□□ 0.68
TIMD4Q96H15 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TIMD4Q96H15 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TIMD4Q96H15 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TIMD4Q96H15 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TIMD4Q96H15 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TIMD4Q96H15 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.31■□□□□ 0.68
TIMD4Q96H15 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TIMD4Q96H15 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TIMD4Q96H15 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.31■□□□□ 0.68
TIMD4Q96H15 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TIMD4Q96H15 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TIMD4Q96H15 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TIMD4Q96H15 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.3■□□□□ 0.68
TIMD4Q96H15 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms