Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP9XQ93008 AC136469.2-201ENST00000623944 1028 ntBASIC20.5■□□□□ 0.87
USP9XQ93008 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.5■□□□□ 0.87
USP9XQ93008 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.5■□□□□ 0.87
USP9XQ93008 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP9XQ93008 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.49■□□□□ 0.87
USP9XQ93008 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.49■□□□□ 0.87
USP9XQ93008 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.49■□□□□ 0.87
USP9XQ93008 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.49■□□□□ 0.87
USP9XQ93008 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP9XQ93008 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP9XQ93008 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP9XQ93008 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.48■□□□□ 0.87
USP9XQ93008 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.48■□□□□ 0.87
USP9XQ93008 FOXO3B-201ENST00000395675 1928 ntBASIC20.48■□□□□ 0.87
USP9XQ93008 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
USP9XQ93008 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
USP9XQ93008 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP9XQ93008 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
USP9XQ93008 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP9XQ93008 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP9XQ93008 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP9XQ93008 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.47■□□□□ 0.87
USP9XQ93008 AC090877.2-201ENST00000558441 1738 ntBASIC20.47■□□□□ 0.87
USP9XQ93008 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.46■□□□□ 0.87
USP9XQ93008 DRD5P2-201ENST00000421395 2012 ntBASIC20.46■□□□□ 0.87
USP9XQ93008 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP9XQ93008 C17orf82-201ENST00000623772 1530 ntBASIC20.46■□□□□ 0.87
USP9XQ93008 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.46■□□□□ 0.87
USP9XQ93008 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP9XQ93008 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP9XQ93008 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
USP9XQ93008 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.46■□□□□ 0.87
USP9XQ93008 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP9XQ93008 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.45■□□□□ 0.86
USP9XQ93008 AC027612.3-201ENST00000413684 1047 ntBASIC20.45■□□□□ 0.86
USP9XQ93008 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP9XQ93008 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP9XQ93008 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.45■□□□□ 0.86
USP9XQ93008 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.45■□□□□ 0.86
USP9XQ93008 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP9XQ93008 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.45■□□□□ 0.86
USP9XQ93008 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.45■□□□□ 0.86
USP9XQ93008 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.45■□□□□ 0.86
USP9XQ93008 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.45■□□□□ 0.86
USP9XQ93008 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.45■□□□□ 0.86
USP9XQ93008 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.45■□□□□ 0.86
USP9XQ93008 AC139426.1-201ENST00000568218 2529 ntBASIC20.45■□□□□ 0.86
USP9XQ93008 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
USP9XQ93008 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP9XQ93008 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
USP9XQ93008 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.44■□□□□ 0.86
USP9XQ93008 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP9XQ93008 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP9XQ93008 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP9XQ93008 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP9XQ93008 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP9XQ93008 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.44■□□□□ 0.86
USP9XQ93008 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP9XQ93008 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.43■□□□□ 0.86
USP9XQ93008 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.43■□□□□ 0.86
USP9XQ93008 AC099791.2-201ENST00000605725 427 ntBASIC20.43■□□□□ 0.86
USP9XQ93008 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.43■□□□□ 0.86
USP9XQ93008 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP9XQ93008 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP9XQ93008 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP9XQ93008 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
USP9XQ93008 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
USP9XQ93008 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.42■□□□□ 0.86
USP9XQ93008 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.42■□□□□ 0.86
USP9XQ93008 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.42■□□□□ 0.86
USP9XQ93008 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP9XQ93008 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP9XQ93008 AC009102.2-201ENST00000606772 1639 ntBASIC20.42■□□□□ 0.86
USP9XQ93008 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP9XQ93008 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP9XQ93008 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP9XQ93008 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.41■□□□□ 0.86
USP9XQ93008 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP9XQ93008 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP9XQ93008 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.41■□□□□ 0.86
USP9XQ93008 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP9XQ93008 AL358852.1-201ENST00000623174 1268 ntBASIC20.41■□□□□ 0.86
USP9XQ93008 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.4■□□□□ 0.86
USP9XQ93008 AC006455.2-201ENST00000429931 906 ntBASIC20.4■□□□□ 0.86
USP9XQ93008 TERF1P2-201ENST00000583350 1212 ntBASIC20.4■□□□□ 0.86
USP9XQ93008 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.4■□□□□ 0.86
USP9XQ93008 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.39■□□□□ 0.86
USP9XQ93008 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP9XQ93008 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP9XQ93008 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.39■□□□□ 0.85
USP9XQ93008 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP9XQ93008 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP9XQ93008 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.39■□□□□ 0.85
USP9XQ93008 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
USP9XQ93008 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.39■□□□□ 0.85
USP9XQ93008 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.39■□□□□ 0.85
USP9XQ93008 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.39■□□□□ 0.85
USP9XQ93008 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP9XQ93008 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms