Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.33■□□□□ 0.68
RTN4IP1Q8WWV3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.33■□□□□ 0.68
RTN4IP1Q8WWV3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4IP1Q8WWV3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4IP1Q8WWV3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4IP1Q8WWV3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4IP1Q8WWV3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4IP1Q8WWV3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4IP1Q8WWV3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4IP1Q8WWV3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RTN4IP1Q8WWV3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RTN4IP1Q8WWV3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RTN4IP1Q8WWV3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN4IP1Q8WWV3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.32■□□□□ 0.68
RTN4IP1Q8WWV3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4IP1Q8WWV3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4IP1Q8WWV3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4IP1Q8WWV3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4IP1Q8WWV3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RTN4IP1Q8WWV3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4IP1Q8WWV3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.31■□□□□ 0.68
RTN4IP1Q8WWV3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTN4IP1Q8WWV3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4IP1Q8WWV3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4IP1Q8WWV3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4IP1Q8WWV3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4IP1Q8WWV3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.3■□□□□ 0.68
RTN4IP1Q8WWV3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4IP1Q8WWV3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.3■□□□□ 0.68
RTN4IP1Q8WWV3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4IP1Q8WWV3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4IP1Q8WWV3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RTN4IP1Q8WWV3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTN4IP1Q8WWV3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RTN4IP1Q8WWV3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RTN4IP1Q8WWV3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4IP1Q8WWV3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4IP1Q8WWV3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.29■□□□□ 0.68
RTN4IP1Q8WWV3 AC018755.3-202ENST00000596210 929 ntBASIC19.29■□□□□ 0.68
RTN4IP1Q8WWV3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4IP1Q8WWV3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTN4IP1Q8WWV3 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.29■□□□□ 0.68
RTN4IP1Q8WWV3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RTN4IP1Q8WWV3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RTN4IP1Q8WWV3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RTN4IP1Q8WWV3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.29■□□□□ 0.68
RTN4IP1Q8WWV3 C9orf163-202ENST00000624034 2573 ntBASIC19.29■□□□□ 0.68
RTN4IP1Q8WWV3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4IP1Q8WWV3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.28■□□□□ 0.68
RTN4IP1Q8WWV3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4IP1Q8WWV3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4IP1Q8WWV3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4IP1Q8WWV3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4IP1Q8WWV3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4IP1Q8WWV3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4IP1Q8WWV3 HLA-L-211ENST00000482052 1765 ntBASIC19.28■□□□□ 0.68
RTN4IP1Q8WWV3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4IP1Q8WWV3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4IP1Q8WWV3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4IP1Q8WWV3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4IP1Q8WWV3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4IP1Q8WWV3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTN4IP1Q8WWV3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTN4IP1Q8WWV3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RTN4IP1Q8WWV3 KRT18P60-201ENST00000312876 1297 ntBASIC19.27■□□□□ 0.68
RTN4IP1Q8WWV3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTN4IP1Q8WWV3 SPCS2P3-201ENST00000500401 656 ntBASIC19.27■□□□□ 0.68
RTN4IP1Q8WWV3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RTN4IP1Q8WWV3 NTF6A-201ENST00000591175 560 ntBASIC19.27■□□□□ 0.68
RTN4IP1Q8WWV3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTN4IP1Q8WWV3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4IP1Q8WWV3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4IP1Q8WWV3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4IP1Q8WWV3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4IP1Q8WWV3 DUX4L9-201ENST00000449051 1259 ntBASIC19.26■□□□□ 0.67
RTN4IP1Q8WWV3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4IP1Q8WWV3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RTN4IP1Q8WWV3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.26■□□□□ 0.67
RTN4IP1Q8WWV3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.26■□□□□ 0.67
RTN4IP1Q8WWV3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTN4IP1Q8WWV3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4IP1Q8WWV3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RTN4IP1Q8WWV3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4IP1Q8WWV3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4IP1Q8WWV3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RTN4IP1Q8WWV3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.25■□□□□ 0.67
RTN4IP1Q8WWV3 MIR6765-201ENST00000614092 87 ntBASIC19.25■□□□□ 0.67
RTN4IP1Q8WWV3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTN4IP1Q8WWV3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.25■□□□□ 0.67
RTN4IP1Q8WWV3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.25■□□□□ 0.67
RTN4IP1Q8WWV3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RTN4IP1Q8WWV3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms