Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDND2Q8NHS1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDND2Q8NHS1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDND2Q8NHS1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDND2Q8NHS1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDND2Q8NHS1 AC010501.1-201ENST00000606270 1962 ntBASIC19.56■□□□□ 0.72
CLDND2Q8NHS1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDND2Q8NHS1 MTDHP2-201ENST00000601468 714 ntBASIC19.56■□□□□ 0.72
CLDND2Q8NHS1 AC010997.5-201ENST00000609182 354 ntBASIC19.56■□□□□ 0.72
CLDND2Q8NHS1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDND2Q8NHS1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDND2Q8NHS1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.55■□□□□ 0.72
CLDND2Q8NHS1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CLDND2Q8NHS1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDND2Q8NHS1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDND2Q8NHS1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
CLDND2Q8NHS1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.55■□□□□ 0.72
CLDND2Q8NHS1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDND2Q8NHS1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDND2Q8NHS1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDND2Q8NHS1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDND2Q8NHS1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDND2Q8NHS1 AF131216.4-201ENST00000638924 1588 ntBASIC19.54■□□□□ 0.72
CLDND2Q8NHS1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDND2Q8NHS1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDND2Q8NHS1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.54■□□□□ 0.72
CLDND2Q8NHS1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDND2Q8NHS1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDND2Q8NHS1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDND2Q8NHS1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CLDND2Q8NHS1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDND2Q8NHS1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDND2Q8NHS1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDND2Q8NHS1 AC133561.1-201ENST00000568600 2415 ntBASIC19.53■□□□□ 0.72
CLDND2Q8NHS1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDND2Q8NHS1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.53■□□□□ 0.72
CLDND2Q8NHS1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDND2Q8NHS1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
CLDND2Q8NHS1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDND2Q8NHS1 AC090877.2-201ENST00000558441 1738 ntBASIC19.53■□□□□ 0.72
CLDND2Q8NHS1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CLDND2Q8NHS1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDND2Q8NHS1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDND2Q8NHS1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDND2Q8NHS1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDND2Q8NHS1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CLDND2Q8NHS1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDND2Q8NHS1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDND2Q8NHS1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDND2Q8NHS1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDND2Q8NHS1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.52■□□□□ 0.72
CLDND2Q8NHS1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDND2Q8NHS1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLDND2Q8NHS1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CLDND2Q8NHS1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDND2Q8NHS1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDND2Q8NHS1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.51■□□□□ 0.71
CLDND2Q8NHS1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.51■□□□□ 0.71
CLDND2Q8NHS1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.51■□□□□ 0.71
CLDND2Q8NHS1 MIR6724-1-201ENST00000616420 92 ntBASIC19.51■□□□□ 0.71
CLDND2Q8NHS1 MIR6724-2-201ENST00000616483 92 ntBASIC19.51■□□□□ 0.71
CLDND2Q8NHS1 MIR6724-4-201ENST00000617390 92 ntBASIC19.51■□□□□ 0.71
CLDND2Q8NHS1 MIR6724-3-201ENST00000622482 92 ntBASIC19.51■□□□□ 0.71
CLDND2Q8NHS1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDND2Q8NHS1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLDND2Q8NHS1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDND2Q8NHS1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDND2Q8NHS1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDND2Q8NHS1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDND2Q8NHS1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
CLDND2Q8NHS1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDND2Q8NHS1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDND2Q8NHS1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CLDND2Q8NHS1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDND2Q8NHS1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.5■□□□□ 0.71
CLDND2Q8NHS1 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.5■□□□□ 0.71
CLDND2Q8NHS1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.5■□□□□ 0.71
CLDND2Q8NHS1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDND2Q8NHS1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CLDND2Q8NHS1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDND2Q8NHS1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDND2Q8NHS1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDND2Q8NHS1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.5■□□□□ 0.71
CLDND2Q8NHS1 AC019069.1-201ENST00000610008 1333 ntBASIC19.5■□□□□ 0.71
CLDND2Q8NHS1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDND2Q8NHS1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDND2Q8NHS1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDND2Q8NHS1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDND2Q8NHS1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDND2Q8NHS1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDND2Q8NHS1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDND2Q8NHS1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDND2Q8NHS1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.49■□□□□ 0.71
CLDND2Q8NHS1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.49■□□□□ 0.71
CLDND2Q8NHS1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.49■□□□□ 0.71
CLDND2Q8NHS1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDND2Q8NHS1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDND2Q8NHS1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDND2Q8NHS1 AL117332.1-201ENST00000622628 974 ntBASIC19.49■□□□□ 0.71
CLDND2Q8NHS1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms