Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SETD9Q8NE22 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.17■□□□□ 0.98
SETD9Q8NE22 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SETD9Q8NE22 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SETD9Q8NE22 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SETD9Q8NE22 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SETD9Q8NE22 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SETD9Q8NE22 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SETD9Q8NE22 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SETD9Q8NE22 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.16■□□□□ 0.98
SETD9Q8NE22 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SETD9Q8NE22 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
SETD9Q8NE22 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SETD9Q8NE22 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SETD9Q8NE22 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SETD9Q8NE22 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SETD9Q8NE22 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.15■□□□□ 0.98
SETD9Q8NE22 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SETD9Q8NE22 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.15■□□□□ 0.98
SETD9Q8NE22 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SETD9Q8NE22 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SETD9Q8NE22 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.15■□□□□ 0.98
SETD9Q8NE22 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SETD9Q8NE22 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SETD9Q8NE22 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SETD9Q8NE22 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
SETD9Q8NE22 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SETD9Q8NE22 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SETD9Q8NE22 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SETD9Q8NE22 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SETD9Q8NE22 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SETD9Q8NE22 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SETD9Q8NE22 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SETD9Q8NE22 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SETD9Q8NE22 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SETD9Q8NE22 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SETD9Q8NE22 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SETD9Q8NE22 AC127496.7-201ENST00000625110 1798 ntBASIC21.13■□□□□ 0.97
SETD9Q8NE22 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
SETD9Q8NE22 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SETD9Q8NE22 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SETD9Q8NE22 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SETD9Q8NE22 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SETD9Q8NE22 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SETD9Q8NE22 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SETD9Q8NE22 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SETD9Q8NE22 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SETD9Q8NE22 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.12■□□□□ 0.97
SETD9Q8NE22 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.12■□□□□ 0.97
SETD9Q8NE22 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.12■□□□□ 0.97
SETD9Q8NE22 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SETD9Q8NE22 LINC00526-201ENST00000581067 1875 ntBASIC21.11■□□□□ 0.97
SETD9Q8NE22 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SETD9Q8NE22 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SETD9Q8NE22 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SETD9Q8NE22 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SETD9Q8NE22 AL162393.1-201ENST00000437852 946 ntBASIC21.11■□□□□ 0.97
SETD9Q8NE22 HLA-V-202ENST00000446817 847 ntBASIC21.11■□□□□ 0.97
SETD9Q8NE22 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SETD9Q8NE22 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.11■□□□□ 0.97
SETD9Q8NE22 ANOS2P-203ENST00000472227 1816 ntBASIC21.11■□□□□ 0.97
SETD9Q8NE22 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SETD9Q8NE22 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SETD9Q8NE22 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SETD9Q8NE22 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SETD9Q8NE22 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SETD9Q8NE22 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SETD9Q8NE22 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SETD9Q8NE22 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.1■□□□□ 0.97
SETD9Q8NE22 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SETD9Q8NE22 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SETD9Q8NE22 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SETD9Q8NE22 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.1■□□□□ 0.97
SETD9Q8NE22 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SETD9Q8NE22 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SETD9Q8NE22 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SETD9Q8NE22 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SETD9Q8NE22 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SETD9Q8NE22 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SETD9Q8NE22 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.09■□□□□ 0.97
SETD9Q8NE22 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SETD9Q8NE22 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SETD9Q8NE22 DUSP8P3-201ENST00000399571 1760 ntBASIC21.09■□□□□ 0.97
SETD9Q8NE22 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SETD9Q8NE22 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SETD9Q8NE22 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SETD9Q8NE22 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SETD9Q8NE22 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SETD9Q8NE22 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SETD9Q8NE22 AC137767.1-201ENST00000602918 1920 ntBASIC21.08■□□□□ 0.97
SETD9Q8NE22 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.08■□□□□ 0.97
SETD9Q8NE22 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SETD9Q8NE22 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SETD9Q8NE22 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
SETD9Q8NE22 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SETD9Q8NE22 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SETD9Q8NE22 AC092068.2-201ENST00000590491 1708 ntBASIC21.07■□□□□ 0.96
SETD9Q8NE22 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SETD9Q8NE22 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SETD9Q8NE22 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms