Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
NPAS4Q8IUM7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.04■■□□□ 1.6
NPAS4Q8IUM7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.04■■□□□ 1.6
NPAS4Q8IUM7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.04■■□□□ 1.6
NPAS4Q8IUM7 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.04■■□□□ 1.6
NPAS4Q8IUM7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.03■■□□□ 1.6
NPAS4Q8IUM7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NPAS4Q8IUM7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.03■■□□□ 1.6
NPAS4Q8IUM7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.03■■□□□ 1.6
NPAS4Q8IUM7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.03■■□□□ 1.6
NPAS4Q8IUM7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
NPAS4Q8IUM7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
NPAS4Q8IUM7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NPAS4Q8IUM7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NPAS4Q8IUM7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.02■■□□□ 1.6
NPAS4Q8IUM7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 AC026271.2-201ENST00000428091 497 ntBASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 AC092171.4-201ENST00000609130 632 ntBASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 AL136967.2-201ENST00000623968 743 ntBASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 AC131274.2-201ENST00000580697 1507 ntBASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
NPAS4Q8IUM7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NPAS4Q8IUM7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NPAS4Q8IUM7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
NPAS4Q8IUM7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25■■□□□ 1.59
NPAS4Q8IUM7 AF213884.3-201ENST00000563833 479 ntBASIC25■■□□□ 1.59
NPAS4Q8IUM7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
NPAS4Q8IUM7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NPAS4Q8IUM7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
NPAS4Q8IUM7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NPAS4Q8IUM7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
NPAS4Q8IUM7 AC105265.2-201ENST00000467189 838 ntBASIC24.99■■□□□ 1.59
NPAS4Q8IUM7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.99■■□□□ 1.59
NPAS4Q8IUM7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
NPAS4Q8IUM7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.99■■□□□ 1.59
NPAS4Q8IUM7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
NPAS4Q8IUM7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.98■■□□□ 1.59
NPAS4Q8IUM7 SYT6-210ENST00000641643 1587 ntBASIC24.98■■□□□ 1.59
NPAS4Q8IUM7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.98■■□□□ 1.59
NPAS4Q8IUM7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.98■■□□□ 1.59
NPAS4Q8IUM7 MIR939-201ENST00000401314 82 ntBASIC24.98■■□□□ 1.59
NPAS4Q8IUM7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.98■■□□□ 1.59
NPAS4Q8IUM7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
NPAS4Q8IUM7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.98■■□□□ 1.59
NPAS4Q8IUM7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NPAS4Q8IUM7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NPAS4Q8IUM7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.97■■□□□ 1.59
NPAS4Q8IUM7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
NPAS4Q8IUM7 AP001330.3-201ENST00000520123 633 ntBASIC24.97■■□□□ 1.59
NPAS4Q8IUM7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
NPAS4Q8IUM7 AL121749.1-202ENST00000609313 2153 ntBASIC24.97■■□□□ 1.59
NPAS4Q8IUM7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
NPAS4Q8IUM7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
NPAS4Q8IUM7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
NPAS4Q8IUM7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
NPAS4Q8IUM7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
NPAS4Q8IUM7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
NPAS4Q8IUM7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
NPAS4Q8IUM7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
NPAS4Q8IUM7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
NPAS4Q8IUM7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
NPAS4Q8IUM7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.58
NPAS4Q8IUM7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
NPAS4Q8IUM7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
NPAS4Q8IUM7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
NPAS4Q8IUM7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
NPAS4Q8IUM7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
NPAS4Q8IUM7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms