Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CSMD2Q7Z408 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSMD2Q7Z408 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSMD2Q7Z408 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.79■□□□□ 0.76
CSMD2Q7Z408 AC011298.3-201ENST00000615796 283 ntBASIC19.79■□□□□ 0.76
CSMD2Q7Z408 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.79■□□□□ 0.76
CSMD2Q7Z408 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CSMD2Q7Z408 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.78■□□□□ 0.76
CSMD2Q7Z408 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSMD2Q7Z408 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSMD2Q7Z408 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSMD2Q7Z408 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSMD2Q7Z408 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSMD2Q7Z408 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSMD2Q7Z408 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSMD2Q7Z408 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CSMD2Q7Z408 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.77■□□□□ 0.76
CSMD2Q7Z408 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSMD2Q7Z408 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.77■□□□□ 0.76
CSMD2Q7Z408 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.77■□□□□ 0.76
CSMD2Q7Z408 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CSMD2Q7Z408 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CSMD2Q7Z408 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.77■□□□□ 0.75
CSMD2Q7Z408 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CSMD2Q7Z408 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.77■□□□□ 0.75
CSMD2Q7Z408 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSMD2Q7Z408 MIR6722-201ENST00000617286 78 ntBASIC19.76■□□□□ 0.75
CSMD2Q7Z408 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.76■□□□□ 0.75
CSMD2Q7Z408 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.76■□□□□ 0.75
CSMD2Q7Z408 AC004448.1-201ENST00000458332 883 ntBASIC19.76■□□□□ 0.75
CSMD2Q7Z408 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.76■□□□□ 0.75
CSMD2Q7Z408 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.76■□□□□ 0.75
CSMD2Q7Z408 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CSMD2Q7Z408 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSMD2Q7Z408 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSMD2Q7Z408 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.75■□□□□ 0.75
CSMD2Q7Z408 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSMD2Q7Z408 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CSMD2Q7Z408 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.75■□□□□ 0.75
CSMD2Q7Z408 AC233992.3-201ENST00000607491 485 ntBASIC19.75■□□□□ 0.75
CSMD2Q7Z408 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSMD2Q7Z408 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.75■□□□□ 0.75
CSMD2Q7Z408 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSMD2Q7Z408 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.75■□□□□ 0.75
CSMD2Q7Z408 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSMD2Q7Z408 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CSMD2Q7Z408 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSMD2Q7Z408 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.74■□□□□ 0.75
CSMD2Q7Z408 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CSMD2Q7Z408 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CSMD2Q7Z408 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSMD2Q7Z408 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSMD2Q7Z408 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSMD2Q7Z408 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSMD2Q7Z408 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.74■□□□□ 0.75
CSMD2Q7Z408 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CSMD2Q7Z408 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.74■□□□□ 0.75
CSMD2Q7Z408 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSMD2Q7Z408 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CSMD2Q7Z408 AC027612.3-201ENST00000413684 1047 ntBASIC19.74■□□□□ 0.75
CSMD2Q7Z408 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSMD2Q7Z408 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSMD2Q7Z408 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.73■□□□□ 0.75
CSMD2Q7Z408 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.73■□□□□ 0.75
CSMD2Q7Z408 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.73■□□□□ 0.75
CSMD2Q7Z408 AC066615.1-201ENST00000640911 628 ntBASIC19.73■□□□□ 0.75
CSMD2Q7Z408 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSMD2Q7Z408 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSMD2Q7Z408 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSMD2Q7Z408 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSMD2Q7Z408 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.72■□□□□ 0.75
CSMD2Q7Z408 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.72■□□□□ 0.75
CSMD2Q7Z408 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.72■□□□□ 0.75
CSMD2Q7Z408 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.72■□□□□ 0.75
CSMD2Q7Z408 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSMD2Q7Z408 AC136469.2-201ENST00000623944 1028 ntBASIC19.72■□□□□ 0.75
CSMD2Q7Z408 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.72■□□□□ 0.75
CSMD2Q7Z408 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSMD2Q7Z408 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSMD2Q7Z408 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSMD2Q7Z408 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSMD2Q7Z408 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.71■□□□□ 0.75
CSMD2Q7Z408 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.71■□□□□ 0.75
CSMD2Q7Z408 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.71■□□□□ 0.75
CSMD2Q7Z408 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.71■□□□□ 0.75
CSMD2Q7Z408 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSMD2Q7Z408 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSMD2Q7Z408 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSMD2Q7Z408 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSMD2Q7Z408 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSMD2Q7Z408 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSMD2Q7Z408 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CSMD2Q7Z408 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CSMD2Q7Z408 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSMD2Q7Z408 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSMD2Q7Z408 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSMD2Q7Z408 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CSMD2Q7Z408 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CSMD2Q7Z408 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.7■□□□□ 0.74
CSMD2Q7Z408 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms