Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PPP4R3AQ6IN85 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.26■■□□□ 1.79
PPP4R3AQ6IN85 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PPP4R3AQ6IN85 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.26■■□□□ 1.79
PPP4R3AQ6IN85 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PPP4R3AQ6IN85 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
PPP4R3AQ6IN85 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
PPP4R3AQ6IN85 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
PPP4R3AQ6IN85 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.25■■□□□ 1.79
PPP4R3AQ6IN85 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PPP4R3AQ6IN85 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PPP4R3AQ6IN85 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.24■■□□□ 1.79
PPP4R3AQ6IN85 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
PPP4R3AQ6IN85 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.24■■□□□ 1.79
PPP4R3AQ6IN85 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.24■■□□□ 1.79
PPP4R3AQ6IN85 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.24■■□□□ 1.79
PPP4R3AQ6IN85 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PPP4R3AQ6IN85 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PPP4R3AQ6IN85 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PPP4R3AQ6IN85 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PPP4R3AQ6IN85 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PPP4R3AQ6IN85 AC239859.2-201ENST00000444165 318 ntBASIC26.23■■□□□ 1.79
PPP4R3AQ6IN85 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PPP4R3AQ6IN85 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
PPP4R3AQ6IN85 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PPP4R3AQ6IN85 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
PPP4R3AQ6IN85 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.22■■□□□ 1.79
PPP4R3AQ6IN85 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PPP4R3AQ6IN85 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.22■■□□□ 1.79
PPP4R3AQ6IN85 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.22■■□□□ 1.79
PPP4R3AQ6IN85 AC131274.2-201ENST00000580697 1507 ntBASIC26.22■■□□□ 1.79
PPP4R3AQ6IN85 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PPP4R3AQ6IN85 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PPP4R3AQ6IN85 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PPP4R3AQ6IN85 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PPP4R3AQ6IN85 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
PPP4R3AQ6IN85 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PPP4R3AQ6IN85 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
PPP4R3AQ6IN85 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
PPP4R3AQ6IN85 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.21■■□□□ 1.79
PPP4R3AQ6IN85 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.21■■□□□ 1.79
PPP4R3AQ6IN85 AL161729.1-201ENST00000604104 1402 ntBASIC26.21■■□□□ 1.79
PPP4R3AQ6IN85 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PPP4R3AQ6IN85 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
PPP4R3AQ6IN85 LINC00543-201ENST00000567234 1845 ntBASIC26.21■■□□□ 1.79
PPP4R3AQ6IN85 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
PPP4R3AQ6IN85 LINC01124-201ENST00000409786 2117 ntBASIC26.2■■□□□ 1.79
PPP4R3AQ6IN85 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
PPP4R3AQ6IN85 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PPP4R3AQ6IN85 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
PPP4R3AQ6IN85 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.2■■□□□ 1.78
PPP4R3AQ6IN85 KRT125P-201ENST00000546827 989 ntBASIC26.2■■□□□ 1.78
PPP4R3AQ6IN85 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.2■■□□□ 1.78
PPP4R3AQ6IN85 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PPP4R3AQ6IN85 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.2■■□□□ 1.78
PPP4R3AQ6IN85 AC141586.4-201ENST00000624558 1573 ntBASIC26.2■■□□□ 1.78
PPP4R3AQ6IN85 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PPP4R3AQ6IN85 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PPP4R3AQ6IN85 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PPP4R3AQ6IN85 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.19■■□□□ 1.78
PPP4R3AQ6IN85 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.19■■□□□ 1.78
PPP4R3AQ6IN85 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.19■■□□□ 1.78
PPP4R3AQ6IN85 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.19■■□□□ 1.78
PPP4R3AQ6IN85 AL022069.1-201ENST00000568025 1636 ntBASIC26.18■■□□□ 1.78
PPP4R3AQ6IN85 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.18■■□□□ 1.78
PPP4R3AQ6IN85 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PPP4R3AQ6IN85 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
PPP4R3AQ6IN85 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.18■■□□□ 1.78
PPP4R3AQ6IN85 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.18■■□□□ 1.78
PPP4R3AQ6IN85 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.18■■□□□ 1.78
PPP4R3AQ6IN85 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.18■■□□□ 1.78
PPP4R3AQ6IN85 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.18■■□□□ 1.78
PPP4R3AQ6IN85 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.17■■□□□ 1.78
PPP4R3AQ6IN85 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.17■■□□□ 1.78
PPP4R3AQ6IN85 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PPP4R3AQ6IN85 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PPP4R3AQ6IN85 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PPP4R3AQ6IN85 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
PPP4R3AQ6IN85 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
PPP4R3AQ6IN85 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.17■■□□□ 1.78
PPP4R3AQ6IN85 MIR4787-201ENST00000607364 84 ntBASIC26.17■■□□□ 1.78
PPP4R3AQ6IN85 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PPP4R3AQ6IN85 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PPP4R3AQ6IN85 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.17■■□□□ 1.78
PPP4R3AQ6IN85 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R3AQ6IN85 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R3AQ6IN85 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R3AQ6IN85 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R3AQ6IN85 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.16■■□□□ 1.78
PPP4R3AQ6IN85 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.16■■□□□ 1.78
PPP4R3AQ6IN85 AC004448.1-201ENST00000458332 883 ntBASIC26.16■■□□□ 1.78
PPP4R3AQ6IN85 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R3AQ6IN85 AC092028.1-203ENST00000608262 953 ntBASIC26.16■■□□□ 1.78
PPP4R3AQ6IN85 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R3AQ6IN85 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R3AQ6IN85 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R3AQ6IN85 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PPP4R3AQ6IN85 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PPP4R3AQ6IN85 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.15■■□□□ 1.78
PPP4R3AQ6IN85 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms