Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.65■■□□□ 1.86
USH1GQ495M9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.65■■□□□ 1.86
USH1GQ495M9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.65■■□□□ 1.86
USH1GQ495M9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.65■■□□□ 1.86
USH1GQ495M9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
USH1GQ495M9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
USH1GQ495M9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
USH1GQ495M9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
USH1GQ495M9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.64■■□□□ 1.86
USH1GQ495M9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
USH1GQ495M9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
USH1GQ495M9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
USH1GQ495M9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
USH1GQ495M9 MIR3621-201ENST00000580529 85 ntBASIC26.64■■□□□ 1.86
USH1GQ495M9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.64■■□□□ 1.86
USH1GQ495M9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
USH1GQ495M9 AC022211.4-201ENST00000625094 2161 ntBASIC26.64■■□□□ 1.85
USH1GQ495M9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
USH1GQ495M9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
USH1GQ495M9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
USH1GQ495M9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.63■■□□□ 1.85
USH1GQ495M9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
USH1GQ495M9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
USH1GQ495M9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.63■■□□□ 1.85
USH1GQ495M9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
USH1GQ495M9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.63■■□□□ 1.85
USH1GQ495M9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.63■■□□□ 1.85
USH1GQ495M9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.63■■□□□ 1.85
USH1GQ495M9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
USH1GQ495M9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
USH1GQ495M9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.63■■□□□ 1.85
USH1GQ495M9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
USH1GQ495M9 AC131274.2-201ENST00000580697 1507 ntBASIC26.62■■□□□ 1.85
USH1GQ495M9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
USH1GQ495M9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.62■■□□□ 1.85
USH1GQ495M9 AC004448.1-201ENST00000458332 883 ntBASIC26.62■■□□□ 1.85
USH1GQ495M9 AL356740.2-201ENST00000601559 647 ntBASIC26.62■■□□□ 1.85
USH1GQ495M9 MIR6722-201ENST00000617286 78 ntBASIC26.62■■□□□ 1.85
USH1GQ495M9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
USH1GQ495M9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
USH1GQ495M9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
USH1GQ495M9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
USH1GQ495M9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
USH1GQ495M9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
USH1GQ495M9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.61■■□□□ 1.85
USH1GQ495M9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
USH1GQ495M9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.61■■□□□ 1.85
USH1GQ495M9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.61■■□□□ 1.85
USH1GQ495M9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
USH1GQ495M9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
USH1GQ495M9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.6■■□□□ 1.85
USH1GQ495M9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.6■■□□□ 1.85
USH1GQ495M9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.6■■□□□ 1.85
USH1GQ495M9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.6■■□□□ 1.85
USH1GQ495M9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
USH1GQ495M9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.6■■□□□ 1.85
USH1GQ495M9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
USH1GQ495M9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
USH1GQ495M9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.59■■□□□ 1.85
USH1GQ495M9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.59■■□□□ 1.85
USH1GQ495M9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
USH1GQ495M9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
USH1GQ495M9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
USH1GQ495M9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.59■■□□□ 1.85
USH1GQ495M9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
USH1GQ495M9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
USH1GQ495M9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.58■■□□□ 1.85
USH1GQ495M9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
USH1GQ495M9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.58■■□□□ 1.85
USH1GQ495M9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.58■■□□□ 1.85
USH1GQ495M9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
USH1GQ495M9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.57■■□□□ 1.84
USH1GQ495M9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
USH1GQ495M9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
USH1GQ495M9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.57■■□□□ 1.84
USH1GQ495M9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
USH1GQ495M9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
USH1GQ495M9 HLA-L-211ENST00000482052 1765 ntBASIC26.56■■□□□ 1.84
USH1GQ495M9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
USH1GQ495M9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.56■■□□□ 1.84
USH1GQ495M9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
USH1GQ495M9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
USH1GQ495M9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.56■■□□□ 1.84
USH1GQ495M9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
USH1GQ495M9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
USH1GQ495M9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
USH1GQ495M9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
USH1GQ495M9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.55■■□□□ 1.84
USH1GQ495M9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
USH1GQ495M9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
USH1GQ495M9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
USH1GQ495M9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
USH1GQ495M9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
USH1GQ495M9 AL136116.3-201ENST00000402907 1138 ntBASIC26.55■■□□□ 1.84
USH1GQ495M9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.55■■□□□ 1.84
USH1GQ495M9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.55■■□□□ 1.84
USH1GQ495M9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
USH1GQ495M9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.55■■□□□ 1.84
USH1GQ495M9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
USH1GQ495M9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms