Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H3AP68431 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.22■□□□□ 0.83
HIST1H3AP68431 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
HIST1H3AP68431 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H3AP68431 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
HIST1H3AP68431 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST1H3AP68431 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
HIST1H3AP68431 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.21■□□□□ 0.83
HIST1H3AP68431 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.21■□□□□ 0.83
HIST1H3AP68431 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST1H3AP68431 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HIST1H3AP68431 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.21■□□□□ 0.83
HIST1H3AP68431 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HIST1H3AP68431 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.21■□□□□ 0.83
HIST1H3AP68431 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HIST1H3AP68431 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H3AP68431 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.2■□□□□ 0.82
HIST1H3AP68431 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.2■□□□□ 0.82
HIST1H3AP68431 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.2■□□□□ 0.82
HIST1H3AP68431 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.2■□□□□ 0.82
HIST1H3AP68431 AC120024.1-201ENST00000562672 995 ntBASIC20.2■□□□□ 0.82
HIST1H3AP68431 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H3AP68431 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H3AP68431 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HIST1H3AP68431 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.19■□□□□ 0.82
HIST1H3AP68431 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H3AP68431 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H3AP68431 MIR4508-201ENST00000584178 70 ntBASIC20.19■□□□□ 0.82
HIST1H3AP68431 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.19■□□□□ 0.82
HIST1H3AP68431 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H3AP68431 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H3AP68431 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H3AP68431 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H3AP68431 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.18■□□□□ 0.82
HIST1H3AP68431 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HIST1H3AP68431 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H3AP68431 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H3AP68431 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H3AP68431 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H3AP68431 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
HIST1H3AP68431 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H3AP68431 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H3AP68431 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
HIST1H3AP68431 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.17■□□□□ 0.82
HIST1H3AP68431 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.17■□□□□ 0.82
HIST1H3AP68431 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
HIST1H3AP68431 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H3AP68431 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.17■□□□□ 0.82
HIST1H3AP68431 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H3AP68431 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H3AP68431 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.16■□□□□ 0.82
HIST1H3AP68431 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H3AP68431 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H3AP68431 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H3AP68431 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST1H3AP68431 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.16■□□□□ 0.82
HIST1H3AP68431 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.16■□□□□ 0.82
HIST1H3AP68431 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST1H3AP68431 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST1H3AP68431 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.16■□□□□ 0.82
HIST1H3AP68431 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HIST1H3AP68431 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H3AP68431 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H3AP68431 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HIST1H3AP68431 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST1H3AP68431 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H3AP68431 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H3AP68431 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H3AP68431 AC103834.1-201ENST00000520383 144 ntBASIC20.15■□□□□ 0.82
HIST1H3AP68431 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H3AP68431 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H3AP68431 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H3AP68431 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H3AP68431 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H3AP68431 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H3AP68431 ABCB10P4-201ENST00000566803 2184 ntBASIC20.15■□□□□ 0.82
HIST1H3AP68431 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST1H3AP68431 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST1H3AP68431 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HIST1H3AP68431 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST1H3AP68431 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST1H3AP68431 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST1H3AP68431 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST1H3AP68431 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.14■□□□□ 0.81
HIST1H3AP68431 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.14■□□□□ 0.81
HIST1H3AP68431 THA1P-201ENST00000590384 1145 ntBASIC20.14■□□□□ 0.81
HIST1H3AP68431 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.14■□□□□ 0.81
HIST1H3AP68431 AL022069.1-201ENST00000568025 1636 ntBASIC20.13■□□□□ 0.81
HIST1H3AP68431 AC131274.2-201ENST00000580697 1507 ntBASIC20.13■□□□□ 0.81
HIST1H3AP68431 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST1H3AP68431 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
HIST1H3AP68431 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HIST1H3AP68431 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.13■□□□□ 0.81
HIST1H3AP68431 MIR4281-201ENST00000580852 62 ntBASIC20.13■□□□□ 0.81
HIST1H3AP68431 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.13■□□□□ 0.81
HIST1H3AP68431 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HIST1H3AP68431 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST1H3AP68431 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST1H3AP68431 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST1H3AP68431 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms