Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ABCB10P4-201ENST00000566803 2184 ntBASIC20.89■□□□□ 0.93
RPS4XP62701 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.88■□□□□ 0.93
RPS4XP62701 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPS4XP62701 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPS4XP62701 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPS4XP62701 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPS4XP62701 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPS4XP62701 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPS4XP62701 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RPS4XP62701 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS4XP62701 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPS4XP62701 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS4XP62701 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPS4XP62701 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS4XP62701 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.87■□□□□ 0.93
RPS4XP62701 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.87■□□□□ 0.93
RPS4XP62701 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPS4XP62701 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS4XP62701 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS4XP62701 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPS4XP62701 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPS4XP62701 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPS4XP62701 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPS4XP62701 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.86■□□□□ 0.93
RPS4XP62701 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPS4XP62701 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS4XP62701 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS4XP62701 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS4XP62701 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPS4XP62701 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS4XP62701 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.85■□□□□ 0.93
RPS4XP62701 AC009299.2-201ENST00000482477 511 ntBASIC20.85■□□□□ 0.93
RPS4XP62701 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPS4XP62701 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS4XP62701 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS4XP62701 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
RPS4XP62701 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPS4XP62701 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPS4XP62701 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RPS4XP62701 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPS4XP62701 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPS4XP62701 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RPS4XP62701 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPS4XP62701 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.84■□□□□ 0.93
RPS4XP62701 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.84■□□□□ 0.93
RPS4XP62701 AC103834.1-201ENST00000520383 144 ntBASIC20.84■□□□□ 0.93
RPS4XP62701 PVT1_1.1-201ENST00000615125 194 ntBASIC20.84■□□□□ 0.93
RPS4XP62701 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPS4XP62701 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RPS4XP62701 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
RPS4XP62701 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPS4XP62701 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.83■□□□□ 0.93
RPS4XP62701 MIR4508-201ENST00000584178 70 ntBASIC20.83■□□□□ 0.93
RPS4XP62701 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPS4XP62701 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.83■□□□□ 0.93
RPS4XP62701 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPS4XP62701 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
RPS4XP62701 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
RPS4XP62701 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
RPS4XP62701 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.83■□□□□ 0.92
RPS4XP62701 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPS4XP62701 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RPS4XP62701 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPS4XP62701 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPS4XP62701 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPS4XP62701 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPS4XP62701 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.82■□□□□ 0.92
RPS4XP62701 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.82■□□□□ 0.92
RPS4XP62701 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPS4XP62701 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
RPS4XP62701 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.81■□□□□ 0.92
RPS4XP62701 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS4XP62701 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS4XP62701 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS4XP62701 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS4XP62701 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.81■□□□□ 0.92
RPS4XP62701 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS4XP62701 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPS4XP62701 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.81■□□□□ 0.92
RPS4XP62701 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPS4XP62701 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS4XP62701 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4XP62701 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4XP62701 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4XP62701 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4XP62701 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RPS4XP62701 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4XP62701 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4XP62701 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.8■□□□□ 0.92
RPS4XP62701 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4XP62701 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4XP62701 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
RPS4XP62701 AC019171.1-201ENST00000601251 1056 ntBASIC20.8■□□□□ 0.92
RPS4XP62701 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4XP62701 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4XP62701 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4XP62701 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPS4XP62701 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.8■□□□□ 0.92
RPS4XP62701 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.8■□□□□ 0.92
RPS4XP62701 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms