Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ACTBP60709 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ACTBP60709 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ACTBP60709 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ACTBP60709 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ACTBP60709 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ACTBP60709 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.77■□□□□ 0.76
ACTBP60709 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
ACTBP60709 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ACTBP60709 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.77■□□□□ 0.76
ACTBP60709 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
ACTBP60709 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.76■□□□□ 0.75
ACTBP60709 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ACTBP60709 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.76■□□□□ 0.75
ACTBP60709 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ACTBP60709 HLA-L-211ENST00000482052 1765 ntBASIC19.76■□□□□ 0.75
ACTBP60709 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ACTBP60709 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ACTBP60709 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ACTBP60709 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ACTBP60709 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTBP60709 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTBP60709 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ACTBP60709 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ACTBP60709 MIR4449-201ENST00000578365 66 ntBASIC19.75■□□□□ 0.75
ACTBP60709 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.75■□□□□ 0.75
ACTBP60709 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ACTBP60709 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTBP60709 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTBP60709 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
ACTBP60709 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ACTBP60709 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.75■□□□□ 0.75
ACTBP60709 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.74■□□□□ 0.75
ACTBP60709 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.74■□□□□ 0.75
ACTBP60709 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACTBP60709 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACTBP60709 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ACTBP60709 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.74■□□□□ 0.75
ACTBP60709 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACTBP60709 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
ACTBP60709 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACTBP60709 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.74■□□□□ 0.75
ACTBP60709 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACTBP60709 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ACTBP60709 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ACTBP60709 AC233723.2-201ENST00000623798 2106 ntBASIC19.73■□□□□ 0.75
ACTBP60709 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ACTBP60709 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ACTBP60709 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
ACTBP60709 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.73■□□□□ 0.75
ACTBP60709 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.73■□□□□ 0.75
ACTBP60709 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ACTBP60709 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.73■□□□□ 0.75
ACTBP60709 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.73■□□□□ 0.75
ACTBP60709 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ACTBP60709 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTBP60709 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ACTBP60709 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ACTBP60709 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ACTBP60709 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ACTBP60709 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTBP60709 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTBP60709 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.71■□□□□ 0.75
ACTBP60709 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTBP60709 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ACTBP60709 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ACTBP60709 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.7■□□□□ 0.74
ACTBP60709 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.7■□□□□ 0.74
ACTBP60709 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.7■□□□□ 0.74
ACTBP60709 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTBP60709 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTBP60709 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.7■□□□□ 0.74
ACTBP60709 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.7■□□□□ 0.74
ACTBP60709 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.7■□□□□ 0.74
ACTBP60709 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTBP60709 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ACTBP60709 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTBP60709 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTBP60709 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACTBP60709 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.69■□□□□ 0.74
ACTBP60709 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ACTBP60709 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTBP60709 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ACTBP60709 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ACTBP60709 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTBP60709 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ACTBP60709 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ACTBP60709 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTBP60709 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ACTBP60709 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.69■□□□□ 0.74
ACTBP60709 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTBP60709 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ACTBP60709 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ACTBP60709 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTBP60709 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTBP60709 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTBP60709 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACTBP60709 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACTBP60709 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ACTBP60709 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms