Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.78■■□□□ 1.08
RAB38P57729 MIR4787-201ENST00000607364 84 ntBASIC21.78■■□□□ 1.08
RAB38P57729 AC131274.2-201ENST00000580697 1507 ntBASIC21.78■■□□□ 1.08
RAB38P57729 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.78■■□□□ 1.08
RAB38P57729 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB38P57729 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB38P57729 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB38P57729 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.77■■□□□ 1.08
RAB38P57729 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
RAB38P57729 AL161729.1-201ENST00000604104 1402 ntBASIC21.77■■□□□ 1.08
RAB38P57729 AC141586.4-201ENST00000624558 1573 ntBASIC21.77■■□□□ 1.08
RAB38P57729 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAB38P57729 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAB38P57729 AL022069.1-201ENST00000568025 1636 ntBASIC21.77■■□□□ 1.07
RAB38P57729 AC135731.1-201ENST00000569415 2548 ntBASIC21.76■■□□□ 1.07
RAB38P57729 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB38P57729 LINC01124-201ENST00000409786 2117 ntBASIC21.76■■□□□ 1.07
RAB38P57729 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAB38P57729 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.76■■□□□ 1.07
RAB38P57729 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.76■■□□□ 1.07
RAB38P57729 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.76■■□□□ 1.07
RAB38P57729 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.76■■□□□ 1.07
RAB38P57729 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.76■■□□□ 1.07
RAB38P57729 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.76■■□□□ 1.07
RAB38P57729 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.76■■□□□ 1.07
RAB38P57729 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAB38P57729 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAB38P57729 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.75■■□□□ 1.07
RAB38P57729 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.75■■□□□ 1.07
RAB38P57729 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAB38P57729 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAB38P57729 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAB38P57729 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
RAB38P57729 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAB38P57729 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RAB38P57729 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.74■■□□□ 1.07
RAB38P57729 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.74■■□□□ 1.07
RAB38P57729 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAB38P57729 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB38P57729 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB38P57729 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RAB38P57729 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
RAB38P57729 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB38P57729 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.74■■□□□ 1.07
RAB38P57729 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB38P57729 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAB38P57729 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.74■■□□□ 1.07
RAB38P57729 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.74■■□□□ 1.07
RAB38P57729 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.74■■□□□ 1.07
RAB38P57729 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAB38P57729 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB38P57729 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAB38P57729 LINC00543-201ENST00000567234 1845 ntBASIC21.73■■□□□ 1.07
RAB38P57729 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.73■■□□□ 1.07
RAB38P57729 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB38P57729 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RAB38P57729 AC092028.1-203ENST00000608262 953 ntBASIC21.73■■□□□ 1.07
RAB38P57729 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RAB38P57729 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB38P57729 AC004448.1-201ENST00000458332 883 ntBASIC21.72■■□□□ 1.07
RAB38P57729 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RAB38P57729 SNX5-217ENST00000606557 1087 ntBASIC21.72■■□□□ 1.07
RAB38P57729 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB38P57729 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB38P57729 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RAB38P57729 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.72■■□□□ 1.07
RAB38P57729 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB38P57729 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RAB38P57729 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.72■■□□□ 1.07
RAB38P57729 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB38P57729 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAB38P57729 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.71■■□□□ 1.07
RAB38P57729 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB38P57729 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.71■■□□□ 1.07
RAB38P57729 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB38P57729 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB38P57729 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB38P57729 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RAB38P57729 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.7■■□□□ 1.07
RAB38P57729 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB38P57729 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB38P57729 GUSBP5-201ENST00000418136 578 ntBASIC21.7■■□□□ 1.06
RAB38P57729 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.7■■□□□ 1.06
RAB38P57729 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RAB38P57729 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB38P57729 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.7■■□□□ 1.06
RAB38P57729 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB38P57729 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.7■■□□□ 1.06
RAB38P57729 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB38P57729 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB38P57729 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.7■■□□□ 1.06
RAB38P57729 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB38P57729 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAB38P57729 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB38P57729 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB38P57729 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.69■■□□□ 1.06
RAB38P57729 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.69■■□□□ 1.06
RAB38P57729 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAB38P57729 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
RAB38P57729 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms