Protein–RNA interactions for Protein: P54687

BCAT1, Branched-chain-amino-acid aminotransferase, cytosolic, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAT1P54687 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
BCAT1P54687 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.42■■□□□ 1.5
BCAT1P54687 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.42■■□□□ 1.5
BCAT1P54687 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.42■■□□□ 1.5
BCAT1P54687 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
BCAT1P54687 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
BCAT1P54687 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
BCAT1P54687 AC135731.1-201ENST00000569415 2548 ntBASIC24.41■■□□□ 1.5
BCAT1P54687 AC131274.2-201ENST00000580697 1507 ntBASIC24.41■■□□□ 1.5
BCAT1P54687 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
BCAT1P54687 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
BCAT1P54687 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.41■■□□□ 1.5
BCAT1P54687 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
BCAT1P54687 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
BCAT1P54687 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
BCAT1P54687 AL022069.1-201ENST00000568025 1636 ntBASIC24.4■■□□□ 1.5
BCAT1P54687 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.4■■□□□ 1.5
BCAT1P54687 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
BCAT1P54687 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
BCAT1P54687 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.4■■□□□ 1.5
BCAT1P54687 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
BCAT1P54687 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
BCAT1P54687 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.39■■□□□ 1.5
BCAT1P54687 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.39■■□□□ 1.5
BCAT1P54687 AL161729.1-201ENST00000604104 1402 ntBASIC24.39■■□□□ 1.5
BCAT1P54687 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
BCAT1P54687 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.39■■□□□ 1.49
BCAT1P54687 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
BCAT1P54687 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.38■■□□□ 1.49
BCAT1P54687 LINC01124-201ENST00000409786 2117 ntBASIC24.38■■□□□ 1.49
BCAT1P54687 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
BCAT1P54687 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.38■■□□□ 1.49
BCAT1P54687 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.38■■□□□ 1.49
BCAT1P54687 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
BCAT1P54687 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
BCAT1P54687 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.38■■□□□ 1.49
BCAT1P54687 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.38■■□□□ 1.49
BCAT1P54687 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
BCAT1P54687 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
BCAT1P54687 GUSBP5-201ENST00000418136 578 ntBASIC24.37■■□□□ 1.49
BCAT1P54687 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
BCAT1P54687 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
BCAT1P54687 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
BCAT1P54687 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.37■■□□□ 1.49
BCAT1P54687 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.37■■□□□ 1.49
BCAT1P54687 SNX5-217ENST00000606557 1087 ntBASIC24.37■■□□□ 1.49
BCAT1P54687 AC092028.1-203ENST00000608262 953 ntBASIC24.37■■□□□ 1.49
BCAT1P54687 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
BCAT1P54687 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
BCAT1P54687 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
BCAT1P54687 AC141586.4-201ENST00000624558 1573 ntBASIC24.37■■□□□ 1.49
BCAT1P54687 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.36■■□□□ 1.49
BCAT1P54687 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
BCAT1P54687 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
BCAT1P54687 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.36■■□□□ 1.49
BCAT1P54687 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
BCAT1P54687 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
BCAT1P54687 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
BCAT1P54687 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
BCAT1P54687 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
BCAT1P54687 LINC00543-201ENST00000567234 1845 ntBASIC24.35■■□□□ 1.49
BCAT1P54687 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
BCAT1P54687 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
BCAT1P54687 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
BCAT1P54687 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
BCAT1P54687 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.35■■□□□ 1.49
BCAT1P54687 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
BCAT1P54687 AC004448.1-201ENST00000458332 883 ntBASIC24.35■■□□□ 1.49
BCAT1P54687 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
BCAT1P54687 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.35■■□□□ 1.49
BCAT1P54687 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
BCAT1P54687 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
BCAT1P54687 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
BCAT1P54687 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
BCAT1P54687 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
BCAT1P54687 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
BCAT1P54687 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.34■■□□□ 1.49
BCAT1P54687 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
BCAT1P54687 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.34■■□□□ 1.49
BCAT1P54687 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
BCAT1P54687 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
BCAT1P54687 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.34■■□□□ 1.49
BCAT1P54687 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.34■■□□□ 1.49
BCAT1P54687 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
BCAT1P54687 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
BCAT1P54687 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
BCAT1P54687 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
BCAT1P54687 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
BCAT1P54687 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
BCAT1P54687 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
BCAT1P54687 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.33■■□□□ 1.49
BCAT1P54687 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
BCAT1P54687 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
BCAT1P54687 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
BCAT1P54687 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
BCAT1P54687 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
BCAT1P54687 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.32■■□□□ 1.48
BCAT1P54687 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
BCAT1P54687 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
BCAT1P54687 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms