Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SSR4P51571 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSR4P51571 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.26■□□□□ 0.99
SSR4P51571 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.26■□□□□ 0.99
SSR4P51571 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.26■□□□□ 0.99
SSR4P51571 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.26■□□□□ 0.99
SSR4P51571 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.26■□□□□ 0.99
SSR4P51571 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSR4P51571 AL117332.1-201ENST00000622628 974 ntBASIC21.26■□□□□ 0.99
SSR4P51571 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SSR4P51571 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SSR4P51571 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSR4P51571 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SSR4P51571 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SSR4P51571 AC008406.3-201ENST00000620001 1374 ntBASIC21.25■□□□□ 0.99
SSR4P51571 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.25■□□□□ 0.99
SSR4P51571 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSR4P51571 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSR4P51571 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.25■□□□□ 0.99
SSR4P51571 AL356740.2-201ENST00000601559 647 ntBASIC21.25■□□□□ 0.99
SSR4P51571 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SSR4P51571 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.25■□□□□ 0.99
SSR4P51571 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSR4P51571 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.24■□□□□ 0.99
SSR4P51571 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.24■□□□□ 0.99
SSR4P51571 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.24■□□□□ 0.99
SSR4P51571 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SSR4P51571 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.24■□□□□ 0.99
SSR4P51571 AC131274.2-201ENST00000580697 1507 ntBASIC21.24■□□□□ 0.99
SSR4P51571 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR4P51571 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.23■□□□□ 0.99
SSR4P51571 AL022069.1-201ENST00000568025 1636 ntBASIC21.23■□□□□ 0.99
SSR4P51571 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR4P51571 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.23■□□□□ 0.99
SSR4P51571 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.23■□□□□ 0.99
SSR4P51571 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.23■□□□□ 0.99
SSR4P51571 MIR3621-201ENST00000580529 85 ntBASIC21.23■□□□□ 0.99
SSR4P51571 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.23■□□□□ 0.99
SSR4P51571 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.23■□□□□ 0.99
SSR4P51571 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SSR4P51571 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SSR4P51571 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR4P51571 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR4P51571 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SSR4P51571 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR4P51571 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR4P51571 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.23■□□□□ 0.99
SSR4P51571 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.23■□□□□ 0.99
SSR4P51571 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
SSR4P51571 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSR4P51571 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.22■□□□□ 0.99
SSR4P51571 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.22■□□□□ 0.99
SSR4P51571 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSR4P51571 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSR4P51571 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SSR4P51571 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
SSR4P51571 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.22■□□□□ 0.99
SSR4P51571 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.22■□□□□ 0.99
SSR4P51571 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR4P51571 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR4P51571 AP003733.4-201ENST00000623785 1697 ntBASIC21.21■□□□□ 0.99
SSR4P51571 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.21■□□□□ 0.99
SSR4P51571 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR4P51571 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.21■□□□□ 0.99
SSR4P51571 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR4P51571 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.21■□□□□ 0.99
SSR4P51571 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.21■□□□□ 0.99
SSR4P51571 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SSR4P51571 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR4P51571 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR4P51571 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SSR4P51571 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR4P51571 HLA-L-211ENST00000482052 1765 ntBASIC21.2■□□□□ 0.99
SSR4P51571 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSR4P51571 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SSR4P51571 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.2■□□□□ 0.98
SSR4P51571 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSR4P51571 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SSR4P51571 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SSR4P51571 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR4P51571 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SSR4P51571 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.19■□□□□ 0.98
SSR4P51571 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.19■□□□□ 0.98
SSR4P51571 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR4P51571 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SSR4P51571 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR4P51571 AC142381.3-201ENST00000568208 1670 ntBASIC21.18■□□□□ 0.98
SSR4P51571 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSR4P51571 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.18■□□□□ 0.98
SSR4P51571 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSR4P51571 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSR4P51571 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.18■□□□□ 0.98
SSR4P51571 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSR4P51571 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSR4P51571 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSR4P51571 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SSR4P51571 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSR4P51571 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSR4P51571 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSR4P51571 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms