Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB5CP51148 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.55■□□□□ 0.56
RAB5CP51148 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB5CP51148 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
RAB5CP51148 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB5CP51148 MIR762-201ENST00000390236 83 ntBASIC18.55■□□□□ 0.56
RAB5CP51148 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RAB5CP51148 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB5CP51148 GUSBP5-202ENST00000510805 1989 ntBASIC18.55■□□□□ 0.56
RAB5CP51148 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RAB5CP51148 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB5CP51148 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.54■□□□□ 0.56
RAB5CP51148 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB5CP51148 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RAB5CP51148 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB5CP51148 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB5CP51148 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB5CP51148 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.54■□□□□ 0.56
RAB5CP51148 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RAB5CP51148 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB5CP51148 RARRES2P7-201ENST00000567349 469 ntBASIC18.54■□□□□ 0.56
RAB5CP51148 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
RAB5CP51148 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB5CP51148 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB5CP51148 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB5CP51148 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB5CP51148 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB5CP51148 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB5CP51148 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB5CP51148 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RAB5CP51148 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB5CP51148 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB5CP51148 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB5CP51148 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB5CP51148 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RAB5CP51148 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB5CP51148 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB5CP51148 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RAB5CP51148 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RAB5CP51148 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RAB5CP51148 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB5CP51148 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB5CP51148 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB5CP51148 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.52■□□□□ 0.56
RAB5CP51148 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB5CP51148 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.52■□□□□ 0.56
RAB5CP51148 MIR6090-201ENST00000622481 60 ntBASIC18.52■□□□□ 0.56
RAB5CP51148 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.52■□□□□ 0.56
RAB5CP51148 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.52■□□□□ 0.56
RAB5CP51148 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB5CP51148 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
RAB5CP51148 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
RAB5CP51148 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RAB5CP51148 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB5CP51148 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB5CP51148 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB5CP51148 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RAB5CP51148 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RAB5CP51148 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RAB5CP51148 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB5CP51148 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.51■□□□□ 0.55
RAB5CP51148 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB5CP51148 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB5CP51148 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.51■□□□□ 0.55
RAB5CP51148 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RAB5CP51148 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB5CP51148 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB5CP51148 FOXO3B-201ENST00000395675 1928 ntBASIC18.51■□□□□ 0.55
RAB5CP51148 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB5CP51148 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB5CP51148 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB5CP51148 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB5CP51148 CAHM-201ENST00000604200 896 ntBASIC18.5■□□□□ 0.55
RAB5CP51148 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
RAB5CP51148 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB5CP51148 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAB5CP51148 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB5CP51148 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
RAB5CP51148 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAB5CP51148 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
RAB5CP51148 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB5CP51148 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB5CP51148 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RAB5CP51148 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB5CP51148 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.49■□□□□ 0.55
RAB5CP51148 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
RAB5CP51148 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB5CP51148 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB5CP51148 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB5CP51148 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB5CP51148 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB5CP51148 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB5CP51148 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB5CP51148 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB5CP51148 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB5CP51148 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.48■□□□□ 0.55
RAB5CP51148 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB5CP51148 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RAB5CP51148 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB5CP51148 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms