Protein–RNA interactions for Protein: P36956

SREBF1, Sterol regulatory element-binding protein 1, humanhuman

Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1P36956 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SREBF1P36956 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.29■■□□□ 1.8
SREBF1P36956 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SREBF1P36956 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SREBF1P36956 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.29■■□□□ 1.8
SREBF1P36956 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SREBF1P36956 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SREBF1P36956 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.29■■□□□ 1.8
SREBF1P36956 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SREBF1P36956 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SREBF1P36956 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
SREBF1P36956 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.28■■□□□ 1.8
SREBF1P36956 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SREBF1P36956 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SREBF1P36956 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.28■■□□□ 1.8
SREBF1P36956 MTDHP2-201ENST00000601468 714 ntBASIC26.28■■□□□ 1.8
SREBF1P36956 AC010997.5-201ENST00000609182 354 ntBASIC26.28■■□□□ 1.8
SREBF1P36956 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.28■■□□□ 1.8
SREBF1P36956 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SREBF1P36956 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SREBF1P36956 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SREBF1P36956 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.27■■□□□ 1.8
SREBF1P36956 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
SREBF1P36956 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SREBF1P36956 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SREBF1P36956 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SREBF1P36956 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SREBF1P36956 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.26■■□□□ 1.79
SREBF1P36956 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.26■■□□□ 1.79
SREBF1P36956 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.26■■□□□ 1.79
SREBF1P36956 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SREBF1P36956 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SREBF1P36956 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.25■■□□□ 1.79
SREBF1P36956 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
SREBF1P36956 MIR6722-201ENST00000617286 78 ntBASIC26.25■■□□□ 1.79
SREBF1P36956 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.25■■□□□ 1.79
SREBF1P36956 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SREBF1P36956 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SREBF1P36956 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SREBF1P36956 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.24■■□□□ 1.79
SREBF1P36956 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.24■■□□□ 1.79
SREBF1P36956 AL022069.1-201ENST00000568025 1636 ntBASIC26.24■■□□□ 1.79
SREBF1P36956 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SREBF1P36956 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SREBF1P36956 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
SREBF1P36956 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SREBF1P36956 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.23■■□□□ 1.79
SREBF1P36956 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.23■■□□□ 1.79
SREBF1P36956 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.23■■□□□ 1.79
SREBF1P36956 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SREBF1P36956 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
SREBF1P36956 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.23■■□□□ 1.79
SREBF1P36956 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.23■■□□□ 1.79
SREBF1P36956 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SREBF1P36956 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.22■■□□□ 1.79
SREBF1P36956 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SREBF1P36956 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SREBF1P36956 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SREBF1P36956 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SREBF1P36956 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.22■■□□□ 1.79
SREBF1P36956 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SREBF1P36956 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
SREBF1P36956 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SREBF1P36956 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
SREBF1P36956 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
SREBF1P36956 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SREBF1P36956 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.21■■□□□ 1.79
SREBF1P36956 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.21■■□□□ 1.79
SREBF1P36956 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SREBF1P36956 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.2■■□□□ 1.79
SREBF1P36956 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
SREBF1P36956 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.2■■□□□ 1.78
SREBF1P36956 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.2■■□□□ 1.78
SREBF1P36956 MIR6724-1-201ENST00000616420 92 ntBASIC26.2■■□□□ 1.78
SREBF1P36956 MIR6724-2-201ENST00000616483 92 ntBASIC26.2■■□□□ 1.78
SREBF1P36956 MIR6724-4-201ENST00000617390 92 ntBASIC26.2■■□□□ 1.78
SREBF1P36956 MIR6724-3-201ENST00000622482 92 ntBASIC26.2■■□□□ 1.78
SREBF1P36956 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
SREBF1P36956 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.2■■□□□ 1.78
SREBF1P36956 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
SREBF1P36956 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SREBF1P36956 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
SREBF1P36956 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SREBF1P36956 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
SREBF1P36956 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SREBF1P36956 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SREBF1P36956 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SREBF1P36956 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.19■■□□□ 1.78
SREBF1P36956 AL161729.1-201ENST00000604104 1402 ntBASIC26.19■■□□□ 1.78
SREBF1P36956 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.19■■□□□ 1.78
SREBF1P36956 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SREBF1P36956 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.19■■□□□ 1.78
SREBF1P36956 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.18■■□□□ 1.78
SREBF1P36956 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SREBF1P36956 AC135731.1-201ENST00000569415 2548 ntBASIC26.18■■□□□ 1.78
SREBF1P36956 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SREBF1P36956 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SREBF1P36956 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
SREBF1P36956 AC131212.1-201ENST00000613771 668 ntBASIC26.18■■□□□ 1.78
SREBF1P36956 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms