Protein–RNA interactions for Protein: P35408

PTGER4, Prostaglandin E2 receptor EP4 subtype, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER4P35408 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTGER4P35408 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTGER4P35408 AC020928.2-201ENST00000588717 2197 ntBASIC20.87■□□□□ 0.93
PTGER4P35408 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTGER4P35408 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTGER4P35408 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTGER4P35408 AC092803.2-201ENST00000564287 1899 ntBASIC20.86■□□□□ 0.93
PTGER4P35408 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PTGER4P35408 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.86■□□□□ 0.93
PTGER4P35408 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTGER4P35408 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.86■□□□□ 0.93
PTGER4P35408 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTGER4P35408 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTGER4P35408 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTGER4P35408 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.86■□□□□ 0.93
PTGER4P35408 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.86■□□□□ 0.93
PTGER4P35408 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PTGER4P35408 AC145676.1-201ENST00000514988 2004 ntBASIC20.86■□□□□ 0.93
PTGER4P35408 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.86■□□□□ 0.93
PTGER4P35408 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTGER4P35408 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.86■□□□□ 0.93
PTGER4P35408 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTGER4P35408 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTGER4P35408 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PTGER4P35408 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTGER4P35408 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.85■□□□□ 0.93
PTGER4P35408 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.85■□□□□ 0.93
PTGER4P35408 MIR6722-201ENST00000617286 78 ntBASIC20.85■□□□□ 0.93
PTGER4P35408 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTGER4P35408 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PTGER4P35408 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTGER4P35408 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTGER4P35408 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.84■□□□□ 0.93
PTGER4P35408 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTGER4P35408 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.84■□□□□ 0.93
PTGER4P35408 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
PTGER4P35408 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.84■□□□□ 0.93
PTGER4P35408 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTGER4P35408 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTGER4P35408 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PTGER4P35408 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.83■□□□□ 0.93
PTGER4P35408 MIR4466-201ENST00000606121 54 ntBASIC20.83■□□□□ 0.93
PTGER4P35408 MIR5787-201ENST00000611784 55 ntBASIC20.83■□□□□ 0.93
PTGER4P35408 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.83■□□□□ 0.93
PTGER4P35408 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PTGER4P35408 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTGER4P35408 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTGER4P35408 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
PTGER4P35408 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTGER4P35408 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.82■□□□□ 0.92
PTGER4P35408 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTGER4P35408 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.82■□□□□ 0.92
PTGER4P35408 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PTGER4P35408 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PTGER4P35408 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTGER4P35408 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTGER4P35408 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTGER4P35408 ZNRF2P3-201ENST00000424200 374 ntBASIC20.81■□□□□ 0.92
PTGER4P35408 SNX5-217ENST00000606557 1087 ntBASIC20.81■□□□□ 0.92
PTGER4P35408 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PTGER4P35408 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTGER4P35408 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.81■□□□□ 0.92
PTGER4P35408 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTGER4P35408 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTGER4P35408 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTGER4P35408 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PTGER4P35408 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.8■□□□□ 0.92
PTGER4P35408 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
PTGER4P35408 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.8■□□□□ 0.92
PTGER4P35408 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.8■□□□□ 0.92
PTGER4P35408 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTGER4P35408 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.8■□□□□ 0.92
PTGER4P35408 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.8■□□□□ 0.92
PTGER4P35408 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.8■□□□□ 0.92
PTGER4P35408 AC142381.2-201ENST00000566120 298 ntBASIC20.8■□□□□ 0.92
PTGER4P35408 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.8■□□□□ 0.92
PTGER4P35408 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTGER4P35408 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTGER4P35408 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTGER4P35408 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTGER4P35408 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PTGER4P35408 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTGER4P35408 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTGER4P35408 AC026271.2-201ENST00000428091 497 ntBASIC20.79■□□□□ 0.92
PTGER4P35408 AC106739.1-201ENST00000617035 715 ntBASIC20.79■□□□□ 0.92
PTGER4P35408 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTGER4P35408 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTGER4P35408 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTGER4P35408 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.78■□□□□ 0.92
PTGER4P35408 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PTGER4P35408 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PTGER4P35408 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTGER4P35408 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PTGER4P35408 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTGER4P35408 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PTGER4P35408 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.77■□□□□ 0.92
PTGER4P35408 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTGER4P35408 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.77■□□□□ 0.92
PTGER4P35408 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTGER4P35408 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms