Protein–RNA interactions for Protein: P34741

SDC2, Syndecan-2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2P34741 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDC2P34741 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDC2P34741 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SDC2P34741 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDC2P34741 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.41■□□□□ 0.86
SDC2P34741 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDC2P34741 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDC2P34741 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDC2P34741 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.41■□□□□ 0.86
SDC2P34741 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDC2P34741 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SDC2P34741 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDC2P34741 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SDC2P34741 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDC2P34741 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SDC2P34741 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDC2P34741 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SDC2P34741 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
SDC2P34741 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SDC2P34741 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.4■□□□□ 0.86
SDC2P34741 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SDC2P34741 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.4■□□□□ 0.86
SDC2P34741 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.4■□□□□ 0.86
SDC2P34741 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SDC2P34741 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SDC2P34741 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDC2P34741 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDC2P34741 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDC2P34741 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SDC2P34741 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDC2P34741 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SDC2P34741 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDC2P34741 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SDC2P34741 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.39■□□□□ 0.85
SDC2P34741 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.38■□□□□ 0.85
SDC2P34741 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.38■□□□□ 0.85
SDC2P34741 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDC2P34741 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDC2P34741 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDC2P34741 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.38■□□□□ 0.85
SDC2P34741 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDC2P34741 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDC2P34741 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDC2P34741 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDC2P34741 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.38■□□□□ 0.85
SDC2P34741 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDC2P34741 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SDC2P34741 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.38■□□□□ 0.85
SDC2P34741 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SDC2P34741 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SDC2P34741 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.37■□□□□ 0.85
SDC2P34741 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SDC2P34741 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SDC2P34741 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SDC2P34741 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SDC2P34741 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SDC2P34741 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.37■□□□□ 0.85
SDC2P34741 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SDC2P34741 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SDC2P34741 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SDC2P34741 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.37■□□□□ 0.85
SDC2P34741 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SDC2P34741 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SDC2P34741 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
SDC2P34741 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SDC2P34741 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.36■□□□□ 0.85
SDC2P34741 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SDC2P34741 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDC2P34741 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SDC2P34741 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDC2P34741 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDC2P34741 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.36■□□□□ 0.85
SDC2P34741 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SDC2P34741 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.36■□□□□ 0.85
SDC2P34741 C1orf229-201ENST00000623686 2258 ntBASIC20.36■□□□□ 0.85
SDC2P34741 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDC2P34741 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDC2P34741 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDC2P34741 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SDC2P34741 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDC2P34741 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDC2P34741 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SDC2P34741 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SDC2P34741 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDC2P34741 DUX4L13-201ENST00000554103 1267 ntBASIC20.35■□□□□ 0.85
SDC2P34741 DUX4L15-201ENST00000611059 1267 ntBASIC20.35■□□□□ 0.85
SDC2P34741 DUX4L23-201ENST00000615195 1269 ntBASIC20.35■□□□□ 0.85
SDC2P34741 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SDC2P34741 DUX4L24-201ENST00000617576 1269 ntBASIC20.35■□□□□ 0.85
SDC2P34741 DUX4L22-201ENST00000618238 1269 ntBASIC20.35■□□□□ 0.85
SDC2P34741 DUX4L20-201ENST00000619712 1269 ntBASIC20.35■□□□□ 0.85
SDC2P34741 DUX4L21-201ENST00000622058 1269 ntBASIC20.35■□□□□ 0.85
SDC2P34741 DUX4L10-201ENST00000622460 1267 ntBASIC20.35■□□□□ 0.85
SDC2P34741 DUX4L25-201ENST00000624915 1269 ntBASIC20.35■□□□□ 0.85
SDC2P34741 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SDC2P34741 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SDC2P34741 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SDC2P34741 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.34■□□□□ 0.85
SDC2P34741 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
SDC2P34741 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms