Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NR4A1P22736 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NR4A1P22736 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.25■□□□□ 0.99
NR4A1P22736 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NR4A1P22736 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NR4A1P22736 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NR4A1P22736 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NR4A1P22736 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NR4A1P22736 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NR4A1P22736 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.25■□□□□ 0.99
NR4A1P22736 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NR4A1P22736 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NR4A1P22736 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NR4A1P22736 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
NR4A1P22736 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.24■□□□□ 0.99
NR4A1P22736 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.24■□□□□ 0.99
NR4A1P22736 AL359504.2-201ENST00000605506 1601 ntBASIC21.24■□□□□ 0.99
NR4A1P22736 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.24■□□□□ 0.99
NR4A1P22736 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.24■□□□□ 0.99
NR4A1P22736 AC141586.4-201ENST00000624558 1573 ntBASIC21.23■□□□□ 0.99
NR4A1P22736 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NR4A1P22736 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NR4A1P22736 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NR4A1P22736 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NR4A1P22736 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.23■□□□□ 0.99
NR4A1P22736 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
NR4A1P22736 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
NR4A1P22736 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NR4A1P22736 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.22■□□□□ 0.99
NR4A1P22736 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NR4A1P22736 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
NR4A1P22736 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NR4A1P22736 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NR4A1P22736 AL024507.2-201ENST00000606070 2574 ntBASIC21.22■□□□□ 0.99
NR4A1P22736 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.22■□□□□ 0.99
NR4A1P22736 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NR4A1P22736 AC007029.1-201ENST00000604183 313 ntBASIC21.22■□□□□ 0.99
NR4A1P22736 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
NR4A1P22736 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NR4A1P22736 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NR4A1P22736 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NR4A1P22736 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NR4A1P22736 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NR4A1P22736 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NR4A1P22736 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.21■□□□□ 0.99
NR4A1P22736 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.21■□□□□ 0.99
NR4A1P22736 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NR4A1P22736 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NR4A1P22736 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NR4A1P22736 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.21■□□□□ 0.99
NR4A1P22736 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
NR4A1P22736 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NR4A1P22736 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NR4A1P22736 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NR4A1P22736 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.2■□□□□ 0.98
NR4A1P22736 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NR4A1P22736 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.2■□□□□ 0.98
NR4A1P22736 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NR4A1P22736 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NR4A1P22736 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NR4A1P22736 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NR4A1P22736 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NR4A1P22736 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.19■□□□□ 0.98
NR4A1P22736 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NR4A1P22736 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.19■□□□□ 0.98
NR4A1P22736 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NR4A1P22736 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NR4A1P22736 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
NR4A1P22736 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NR4A1P22736 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NR4A1P22736 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
NR4A1P22736 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NR4A1P22736 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NR4A1P22736 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NR4A1P22736 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NR4A1P22736 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NR4A1P22736 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.17■□□□□ 0.98
NR4A1P22736 MIR3960-201ENST00000583311 91 ntBASIC21.17■□□□□ 0.98
NR4A1P22736 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NR4A1P22736 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NR4A1P22736 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
NR4A1P22736 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NR4A1P22736 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NR4A1P22736 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NR4A1P22736 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.16■□□□□ 0.98
NR4A1P22736 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NR4A1P22736 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NR4A1P22736 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.16■□□□□ 0.98
NR4A1P22736 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.16■□□□□ 0.98
NR4A1P22736 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NR4A1P22736 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NR4A1P22736 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NR4A1P22736 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NR4A1P22736 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NR4A1P22736 RP9P-202ENST00000450133 1212 ntBASIC21.15■□□□□ 0.98
NR4A1P22736 NTF6A-201ENST00000591175 560 ntBASIC21.15■□□□□ 0.98
NR4A1P22736 AC233723.2-201ENST00000623798 2106 ntBASIC21.15■□□□□ 0.98
NR4A1P22736 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NR4A1P22736 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NR4A1P22736 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms