Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RB1P06400 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
RB1P06400 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RB1P06400 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.73■■□□□ 1.55
RB1P06400 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RB1P06400 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
RB1P06400 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RB1P06400 IRS3P-201ENST00000223076 1006 ntBASIC24.72■■□□□ 1.55
RB1P06400 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RB1P06400 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.72■■□□□ 1.55
RB1P06400 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.72■■□□□ 1.55
RB1P06400 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RB1P06400 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RB1P06400 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RB1P06400 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RB1P06400 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
RB1P06400 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RB1P06400 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
RB1P06400 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RB1P06400 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RB1P06400 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RB1P06400 AC096887.2-201ENST00000623443 1957 ntBASIC24.71■■□□□ 1.55
RB1P06400 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
RB1P06400 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RB1P06400 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RB1P06400 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.7■■□□□ 1.54
RB1P06400 AC099791.2-201ENST00000605725 427 ntBASIC24.7■■□□□ 1.54
RB1P06400 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.7■■□□□ 1.54
RB1P06400 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.7■■□□□ 1.54
RB1P06400 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
RB1P06400 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RB1P06400 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RB1P06400 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.7■■□□□ 1.54
RB1P06400 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RB1P06400 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.69■■□□□ 1.54
RB1P06400 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RB1P06400 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.69■■□□□ 1.54
RB1P06400 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RB1P06400 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.69■■□□□ 1.54
RB1P06400 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RB1P06400 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
RB1P06400 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.68■■□□□ 1.54
RB1P06400 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RB1P06400 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RB1P06400 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.68■■□□□ 1.54
RB1P06400 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.68■■□□□ 1.54
RB1P06400 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.68■■□□□ 1.54
RB1P06400 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.68■■□□□ 1.54
RB1P06400 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
RB1P06400 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.68■■□□□ 1.54
RB1P06400 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RB1P06400 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RB1P06400 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.67■■□□□ 1.54
RB1P06400 AC008764.7-201ENST00000593779 1081 ntBASIC24.67■■□□□ 1.54
RB1P06400 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RB1P06400 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RB1P06400 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
RB1P06400 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RB1P06400 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
RB1P06400 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
RB1P06400 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.66■■□□□ 1.54
RB1P06400 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RB1P06400 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
RB1P06400 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.66■■□□□ 1.54
RB1P06400 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.66■■□□□ 1.54
RB1P06400 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
RB1P06400 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RB1P06400 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.65■■□□□ 1.54
RB1P06400 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RB1P06400 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.65■■□□□ 1.54
RB1P06400 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.65■■□□□ 1.54
RB1P06400 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RB1P06400 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RB1P06400 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.64■■□□□ 1.54
RB1P06400 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
RB1P06400 AC099791.1-201ENST00000416440 715 ntBASIC24.64■■□□□ 1.54
RB1P06400 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RB1P06400 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.64■■□□□ 1.53
RB1P06400 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RB1P06400 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RB1P06400 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.63■■□□□ 1.53
RB1P06400 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.63■■□□□ 1.53
RB1P06400 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
RB1P06400 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RB1P06400 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.62■■□□□ 1.53
RB1P06400 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RB1P06400 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.62■■□□□ 1.53
RB1P06400 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RB1P06400 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RB1P06400 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.62■■□□□ 1.53
RB1P06400 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
RB1P06400 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.62■■□□□ 1.53
RB1P06400 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.62■■□□□ 1.53
RB1P06400 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
RB1P06400 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
RB1P06400 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RB1P06400 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.61■■□□□ 1.53
RB1P06400 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RB1P06400 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RB1P06400 AC241377.3-202ENST00000626088 1088 ntBASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms