Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC14.7□□□□□ -0.06
APOBP04114 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.7□□□□□ -0.06
APOBP04114 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOBP04114 DUX4L19-201ENST00000557448 1267 ntBASIC14.69□□□□□ -0.06
APOBP04114 KRT18P61-201ENST00000585825 1298 ntBASIC14.69□□□□□ -0.06
APOBP04114 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOBP04114 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOBP04114 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.69□□□□□ -0.06
APOBP04114 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOBP04114 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOBP04114 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.69□□□□□ -0.06
APOBP04114 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.69□□□□□ -0.06
APOBP04114 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
APOBP04114 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.69□□□□□ -0.06
APOBP04114 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOBP04114 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOBP04114 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
APOBP04114 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.68□□□□□ -0.06
APOBP04114 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.68□□□□□ -0.06
APOBP04114 TSPY26P-201ENST00000476365 1326 ntBASIC14.68□□□□□ -0.06
APOBP04114 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
APOBP04114 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBP04114 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOBP04114 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBP04114 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOBP04114 ST7-205ENST00000393446 2114 ntTSL 5 BASIC14.68□□□□□ -0.06
APOBP04114 AC096887.2-201ENST00000623443 1957 ntBASIC14.68□□□□□ -0.06
APOBP04114 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
APOBP04114 AC004911.1-201ENST00000416316 871 ntBASIC14.68□□□□□ -0.06
APOBP04114 AL137784.2-201ENST00000607332 1000 ntBASIC14.68□□□□□ -0.06
APOBP04114 AC011298.3-201ENST00000615796 283 ntBASIC14.68□□□□□ -0.06
APOBP04114 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
APOBP04114 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOBP04114 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.67□□□□□ -0.06
APOBP04114 AC233992.3-201ENST00000607491 485 ntBASIC14.67□□□□□ -0.06
APOBP04114 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBP04114 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBP04114 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.67□□□□□ -0.06
APOBP04114 SSSCA1-AS1-201ENST00000567594 614 ntBASIC14.67□□□□□ -0.06
APOBP04114 AP004609.3-201ENST00000610705 1884 ntBASIC14.67□□□□□ -0.06
APOBP04114 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBP04114 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBP04114 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBP04114 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
APOBP04114 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOBP04114 AC009102.2-201ENST00000606772 1639 ntBASIC14.66□□□□□ -0.06
APOBP04114 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
APOBP04114 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOBP04114 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOBP04114 AC123595.1-201ENST00000440769 1046 ntBASIC14.66□□□□□ -0.06
APOBP04114 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC14.66□□□□□ -0.06
APOBP04114 AC005703.6-201ENST00000623265 1329 ntBASIC14.66□□□□□ -0.06
APOBP04114 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOBP04114 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOBP04114 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOBP04114 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOBP04114 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOBP04114 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOBP04114 AC099791.1-201ENST00000416440 715 ntBASIC14.66□□□□□ -0.06
APOBP04114 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
APOBP04114 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
APOBP04114 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOBP04114 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOBP04114 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOBP04114 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.65□□□□□ -0.06
APOBP04114 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
APOBP04114 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOBP04114 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOBP04114 ABHD17AP1-201ENST00000358206 933 ntBASIC14.65□□□□□ -0.06
APOBP04114 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOBP04114 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOBP04114 AC099791.2-201ENST00000605725 427 ntBASIC14.65□□□□□ -0.06
APOBP04114 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOBP04114 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOBP04114 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOBP04114 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
APOBP04114 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOBP04114 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOBP04114 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
APOBP04114 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOBP04114 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOBP04114 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOBP04114 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.64□□□□□ -0.07
APOBP04114 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOBP04114 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.64□□□□□ -0.07
APOBP04114 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
APOBP04114 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOBP04114 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOBP04114 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
APOBP04114 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOBP04114 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.64□□□□□ -0.07
APOBP04114 AC131274.2-201ENST00000580697 1507 ntBASIC14.63□□□□□ -0.07
APOBP04114 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOBP04114 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOBP04114 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOBP04114 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APOBP04114 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APOBP04114 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APOBP04114 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APOBP04114 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms