Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.7■□□□□ 0.58
APOC3P02656 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APOC3P02656 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APOC3P02656 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APOC3P02656 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APOC3P02656 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOC3P02656 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.69■□□□□ 0.58
APOC3P02656 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOC3P02656 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOC3P02656 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOC3P02656 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOC3P02656 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOC3P02656 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.69■□□□□ 0.58
APOC3P02656 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
APOC3P02656 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOC3P02656 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOC3P02656 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
APOC3P02656 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APOC3P02656 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOC3P02656 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.68■□□□□ 0.58
APOC3P02656 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOC3P02656 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
APOC3P02656 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
APOC3P02656 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
APOC3P02656 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOC3P02656 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APOC3P02656 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOC3P02656 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOC3P02656 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOC3P02656 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOC3P02656 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOC3P02656 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APOC3P02656 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOC3P02656 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
APOC3P02656 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.67■□□□□ 0.58
APOC3P02656 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOC3P02656 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOC3P02656 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.67■□□□□ 0.58
APOC3P02656 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOC3P02656 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.66■□□□□ 0.58
APOC3P02656 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
APOC3P02656 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOC3P02656 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC3P02656 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
APOC3P02656 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.66■□□□□ 0.58
APOC3P02656 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.66■□□□□ 0.58
APOC3P02656 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC3P02656 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC3P02656 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.66■□□□□ 0.58
APOC3P02656 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOC3P02656 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOC3P02656 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOC3P02656 ECEL1P1-201ENST00000373592 1742 ntBASIC18.66■□□□□ 0.58
APOC3P02656 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
APOC3P02656 AL391422.3-201ENST00000603791 2761 ntBASIC18.65■□□□□ 0.58
APOC3P02656 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOC3P02656 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOC3P02656 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.65■□□□□ 0.58
APOC3P02656 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.65■□□□□ 0.58
APOC3P02656 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOC3P02656 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.65■□□□□ 0.58
APOC3P02656 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.64■□□□□ 0.58
APOC3P02656 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
APOC3P02656 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.58
APOC3P02656 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
APOC3P02656 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOC3P02656 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.64■□□□□ 0.57
APOC3P02656 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.64■□□□□ 0.57
APOC3P02656 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.64■□□□□ 0.57
APOC3P02656 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APOC3P02656 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOC3P02656 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
APOC3P02656 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
APOC3P02656 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOC3P02656 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
APOC3P02656 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOC3P02656 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APOC3P02656 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOC3P02656 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APOC3P02656 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
APOC3P02656 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOC3P02656 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOC3P02656 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.62■□□□□ 0.57
APOC3P02656 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
APOC3P02656 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOC3P02656 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOC3P02656 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOC3P02656 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOC3P02656 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APOC3P02656 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOC3P02656 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOC3P02656 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
APOC3P02656 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOC3P02656 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
APOC3P02656 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.61■□□□□ 0.57
APOC3P02656 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.61■□□□□ 0.57
APOC3P02656 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
APOC3P02656 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
APOC3P02656 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOC3P02656 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms