Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 KRT16P3-201ENST00000439127 1283 ntBASIC22.95■■□□□ 1.26
SOD1P00441 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SOD1P00441 AC131274.2-201ENST00000580697 1507 ntBASIC22.95■■□□□ 1.26
SOD1P00441 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.95■■□□□ 1.26
SOD1P00441 AP003733.4-201ENST00000623785 1697 ntBASIC22.93■■□□□ 1.26
SOD1P00441 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
SOD1P00441 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SOD1P00441 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SOD1P00441 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.93■■□□□ 1.26
SOD1P00441 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
SOD1P00441 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SOD1P00441 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SOD1P00441 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.92■■□□□ 1.26
SOD1P00441 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.92■■□□□ 1.26
SOD1P00441 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SOD1P00441 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SOD1P00441 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SOD1P00441 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SOD1P00441 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SOD1P00441 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SOD1P00441 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SOD1P00441 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.91■■□□□ 1.26
SOD1P00441 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.91■■□□□ 1.26
SOD1P00441 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SOD1P00441 AC010997.5-201ENST00000609182 354 ntBASIC22.91■■□□□ 1.26
SOD1P00441 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.91■■□□□ 1.26
SOD1P00441 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SOD1P00441 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SOD1P00441 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
SOD1P00441 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.9■■□□□ 1.26
SOD1P00441 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SOD1P00441 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.9■■□□□ 1.26
SOD1P00441 AC004448.1-201ENST00000458332 883 ntBASIC22.9■■□□□ 1.26
SOD1P00441 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
SOD1P00441 MTDHP2-201ENST00000601468 714 ntBASIC22.9■■□□□ 1.26
SOD1P00441 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.9■■□□□ 1.26
SOD1P00441 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.89■■□□□ 1.26
SOD1P00441 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.89■■□□□ 1.25
SOD1P00441 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.89■■□□□ 1.25
SOD1P00441 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SOD1P00441 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SOD1P00441 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.89■■□□□ 1.25
SOD1P00441 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SOD1P00441 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SOD1P00441 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SOD1P00441 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SOD1P00441 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.88■■□□□ 1.25
SOD1P00441 AC131212.1-201ENST00000613771 668 ntBASIC22.88■■□□□ 1.25
SOD1P00441 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.88■■□□□ 1.25
SOD1P00441 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SOD1P00441 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SOD1P00441 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SOD1P00441 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.87■■□□□ 1.25
SOD1P00441 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.87■■□□□ 1.25
SOD1P00441 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.87■■□□□ 1.25
SOD1P00441 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
SOD1P00441 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SOD1P00441 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.86■■□□□ 1.25
SOD1P00441 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SOD1P00441 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SOD1P00441 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
SOD1P00441 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
SOD1P00441 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.86■■□□□ 1.25
SOD1P00441 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
SOD1P00441 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SOD1P00441 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
SOD1P00441 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.86■■□□□ 1.25
SOD1P00441 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.86■■□□□ 1.25
SOD1P00441 MIR6722-201ENST00000617286 78 ntBASIC22.86■■□□□ 1.25
SOD1P00441 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
SOD1P00441 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
SOD1P00441 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SOD1P00441 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
SOD1P00441 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SOD1P00441 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
SOD1P00441 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SOD1P00441 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SOD1P00441 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
SOD1P00441 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.85■■□□□ 1.25
SOD1P00441 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.85■■□□□ 1.25
SOD1P00441 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
SOD1P00441 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.85■■□□□ 1.25
SOD1P00441 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SOD1P00441 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.85■■□□□ 1.25
SOD1P00441 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SOD1P00441 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SOD1P00441 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.84■■□□□ 1.25
SOD1P00441 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.84■■□□□ 1.25
SOD1P00441 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
SOD1P00441 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SOD1P00441 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.84■■□□□ 1.25
SOD1P00441 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
SOD1P00441 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SOD1P00441 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
SOD1P00441 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.83■■□□□ 1.25
SOD1P00441 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SOD1P00441 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SOD1P00441 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SOD1P00441 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SOD1P00441 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms