Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.86■■□□□ 1.41
TSPAN3O60637 MIR6724-1-201ENST00000616420 92 ntBASIC23.86■■□□□ 1.41
TSPAN3O60637 MIR6724-2-201ENST00000616483 92 ntBASIC23.86■■□□□ 1.41
TSPAN3O60637 MIR6724-4-201ENST00000617390 92 ntBASIC23.86■■□□□ 1.41
TSPAN3O60637 MIR6724-3-201ENST00000622482 92 ntBASIC23.86■■□□□ 1.41
TSPAN3O60637 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.86■■□□□ 1.41
TSPAN3O60637 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.86■■□□□ 1.41
TSPAN3O60637 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TSPAN3O60637 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TSPAN3O60637 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
TSPAN3O60637 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TSPAN3O60637 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TSPAN3O60637 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TSPAN3O60637 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.85■■□□□ 1.41
TSPAN3O60637 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TSPAN3O60637 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.85■■□□□ 1.41
TSPAN3O60637 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
TSPAN3O60637 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.84■■□□□ 1.41
TSPAN3O60637 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TSPAN3O60637 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TSPAN3O60637 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
TSPAN3O60637 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TSPAN3O60637 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TSPAN3O60637 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TSPAN3O60637 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TSPAN3O60637 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TSPAN3O60637 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TSPAN3O60637 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
TSPAN3O60637 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.83■■□□□ 1.41
TSPAN3O60637 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.83■■□□□ 1.41
TSPAN3O60637 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.83■■□□□ 1.41
TSPAN3O60637 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.83■■□□□ 1.41
TSPAN3O60637 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TSPAN3O60637 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TSPAN3O60637 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.83■■□□□ 1.4
TSPAN3O60637 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.82■■□□□ 1.4
TSPAN3O60637 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.82■■□□□ 1.4
TSPAN3O60637 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.82■■□□□ 1.4
TSPAN3O60637 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TSPAN3O60637 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TSPAN3O60637 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TSPAN3O60637 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.82■■□□□ 1.4
TSPAN3O60637 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.82■■□□□ 1.4
TSPAN3O60637 AL117332.1-201ENST00000622628 974 ntBASIC23.82■■□□□ 1.4
TSPAN3O60637 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TSPAN3O60637 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TSPAN3O60637 AC008406.3-201ENST00000620001 1374 ntBASIC23.81■■□□□ 1.4
TSPAN3O60637 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.81■■□□□ 1.4
TSPAN3O60637 AC020928.2-201ENST00000588717 2197 ntBASIC23.81■■□□□ 1.4
TSPAN3O60637 AC131274.2-201ENST00000580697 1507 ntBASIC23.81■■□□□ 1.4
TSPAN3O60637 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TSPAN3O60637 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TSPAN3O60637 AC004448.1-201ENST00000458332 883 ntBASIC23.81■■□□□ 1.4
TSPAN3O60637 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.81■■□□□ 1.4
TSPAN3O60637 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.81■■□□□ 1.4
TSPAN3O60637 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.81■■□□□ 1.4
TSPAN3O60637 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
TSPAN3O60637 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TSPAN3O60637 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
TSPAN3O60637 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TSPAN3O60637 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TSPAN3O60637 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TSPAN3O60637 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TSPAN3O60637 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.8■■□□□ 1.4
TSPAN3O60637 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TSPAN3O60637 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
TSPAN3O60637 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TSPAN3O60637 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.8■■□□□ 1.4
TSPAN3O60637 HLA-L-211ENST00000482052 1765 ntBASIC23.8■■□□□ 1.4
TSPAN3O60637 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TSPAN3O60637 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.8■■□□□ 1.4
TSPAN3O60637 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TSPAN3O60637 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TSPAN3O60637 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TSPAN3O60637 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TSPAN3O60637 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TSPAN3O60637 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.78■■□□□ 1.4
TSPAN3O60637 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
TSPAN3O60637 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TSPAN3O60637 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
TSPAN3O60637 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TSPAN3O60637 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.78■■□□□ 1.4
TSPAN3O60637 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.78■■□□□ 1.4
TSPAN3O60637 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.78■■□□□ 1.4
TSPAN3O60637 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.78■■□□□ 1.4
TSPAN3O60637 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.78■■□□□ 1.4
TSPAN3O60637 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TSPAN3O60637 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TSPAN3O60637 AC138932.3-201ENST00000567634 1902 ntBASIC23.77■■□□□ 1.4
TSPAN3O60637 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.77■■□□□ 1.4
TSPAN3O60637 AL356740.2-201ENST00000601559 647 ntBASIC23.77■■□□□ 1.4
TSPAN3O60637 MIR6722-201ENST00000617286 78 ntBASIC23.77■■□□□ 1.4
TSPAN3O60637 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
TSPAN3O60637 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
TSPAN3O60637 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.77■■□□□ 1.4
TSPAN3O60637 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TSPAN3O60637 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TSPAN3O60637 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TSPAN3O60637 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TSPAN3O60637 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms