Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSNA1O43805 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SSNA1O43805 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SSNA1O43805 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSNA1O43805 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.66■□□□□ 0.74
SSNA1O43805 SETD8P1-201ENST00000623146 1180 ntBASIC19.66■□□□□ 0.74
SSNA1O43805 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSNA1O43805 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSNA1O43805 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SSNA1O43805 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSNA1O43805 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSNA1O43805 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSNA1O43805 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSNA1O43805 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSNA1O43805 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSNA1O43805 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSNA1O43805 AC007375.3-201ENST00000600936 2314 ntBASIC19.65■□□□□ 0.74
SSNA1O43805 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSNA1O43805 AC108673.1-201ENST00000510422 1159 ntBASIC19.65■□□□□ 0.74
SSNA1O43805 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.65■□□□□ 0.74
SSNA1O43805 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSNA1O43805 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSNA1O43805 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSNA1O43805 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSNA1O43805 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SSNA1O43805 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SSNA1O43805 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SSNA1O43805 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSNA1O43805 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.64■□□□□ 0.73
SSNA1O43805 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SSNA1O43805 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SSNA1O43805 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSNA1O43805 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SSNA1O43805 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSNA1O43805 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSNA1O43805 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.64■□□□□ 0.73
SSNA1O43805 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSNA1O43805 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSNA1O43805 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
SSNA1O43805 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSNA1O43805 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSNA1O43805 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSNA1O43805 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
SSNA1O43805 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSNA1O43805 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.63■□□□□ 0.73
SSNA1O43805 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.63■□□□□ 0.73
SSNA1O43805 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSNA1O43805 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.63■□□□□ 0.73
SSNA1O43805 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSNA1O43805 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SSNA1O43805 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSNA1O43805 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSNA1O43805 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSNA1O43805 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.62■□□□□ 0.73
SSNA1O43805 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.62■□□□□ 0.73
SSNA1O43805 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.62■□□□□ 0.73
SSNA1O43805 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSNA1O43805 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSNA1O43805 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.62■□□□□ 0.73
SSNA1O43805 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSNA1O43805 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.62■□□□□ 0.73
SSNA1O43805 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSNA1O43805 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSNA1O43805 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.62■□□□□ 0.73
SSNA1O43805 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SSNA1O43805 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSNA1O43805 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSNA1O43805 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.61■□□□□ 0.73
SSNA1O43805 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SSNA1O43805 SLC25A24-204ENST00000569674 2357 ntBASIC19.61■□□□□ 0.73
SSNA1O43805 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSNA1O43805 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSNA1O43805 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSNA1O43805 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.6■□□□□ 0.73
SSNA1O43805 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.6■□□□□ 0.73
SSNA1O43805 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSNA1O43805 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSNA1O43805 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SSNA1O43805 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSNA1O43805 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SSNA1O43805 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSNA1O43805 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSNA1O43805 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SSNA1O43805 GUSBP5-202ENST00000510805 1989 ntBASIC19.59■□□□□ 0.73
SSNA1O43805 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSNA1O43805 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSNA1O43805 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSNA1O43805 RARRES2P7-201ENST00000567349 469 ntBASIC19.59■□□□□ 0.73
SSNA1O43805 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.59■□□□□ 0.73
SSNA1O43805 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSNA1O43805 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSNA1O43805 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SSNA1O43805 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.59■□□□□ 0.73
SSNA1O43805 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSNA1O43805 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSNA1O43805 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.58■□□□□ 0.73
SSNA1O43805 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSNA1O43805 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSNA1O43805 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSNA1O43805 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms