Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARHGEF9O43307 AL139125.2-201ENST00000623134 1869 ntBASIC21.18■□□□□ 0.98
ARHGEF9O43307 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF9O43307 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.17■□□□□ 0.98
ARHGEF9O43307 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.17■□□□□ 0.98
ARHGEF9O43307 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.17■□□□□ 0.98
ARHGEF9O43307 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.17■□□□□ 0.98
ARHGEF9O43307 RAP2CP1-202ENST00000605179 643 ntBASIC21.17■□□□□ 0.98
ARHGEF9O43307 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
ARHGEF9O43307 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ARHGEF9O43307 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
ARHGEF9O43307 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.17■□□□□ 0.98
ARHGEF9O43307 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ARHGEF9O43307 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF9O43307 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARHGEF9O43307 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF9O43307 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF9O43307 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF9O43307 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
ARHGEF9O43307 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF9O43307 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF9O43307 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ARHGEF9O43307 YBX1P4-201ENST00000392794 808 ntBASIC21.16■□□□□ 0.98
ARHGEF9O43307 AC139795.1-202ENST00000500444 432 ntBASIC21.16■□□□□ 0.98
ARHGEF9O43307 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ARHGEF9O43307 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARHGEF9O43307 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
ARHGEF9O43307 AP003733.4-201ENST00000623785 1697 ntBASIC21.15■□□□□ 0.98
ARHGEF9O43307 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ARHGEF9O43307 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ARHGEF9O43307 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ARHGEF9O43307 AL592295.1-201ENST00000400984 884 ntBASIC21.15■□□□□ 0.98
ARHGEF9O43307 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.15■□□□□ 0.98
ARHGEF9O43307 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.15■□□□□ 0.98
ARHGEF9O43307 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ARHGEF9O43307 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ARHGEF9O43307 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ARHGEF9O43307 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ARHGEF9O43307 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.15■□□□□ 0.98
ARHGEF9O43307 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ARHGEF9O43307 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.15■□□□□ 0.98
ARHGEF9O43307 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ARHGEF9O43307 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ARHGEF9O43307 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ARHGEF9O43307 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ARHGEF9O43307 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.14■□□□□ 0.98
ARHGEF9O43307 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.14■□□□□ 0.97
ARHGEF9O43307 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ARHGEF9O43307 AC019069.1-201ENST00000610008 1333 ntBASIC21.14■□□□□ 0.97
ARHGEF9O43307 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ARHGEF9O43307 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.14■□□□□ 0.97
ARHGEF9O43307 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ARHGEF9O43307 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ARHGEF9O43307 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ARHGEF9O43307 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ARHGEF9O43307 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF9O43307 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF9O43307 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF9O43307 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF9O43307 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF9O43307 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.13■□□□□ 0.97
ARHGEF9O43307 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
ARHGEF9O43307 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF9O43307 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.13■□□□□ 0.97
ARHGEF9O43307 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF9O43307 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF9O43307 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF9O43307 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ARHGEF9O43307 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ARHGEF9O43307 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.12■□□□□ 0.97
ARHGEF9O43307 DUX4L9-201ENST00000449051 1259 ntBASIC21.12■□□□□ 0.97
ARHGEF9O43307 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ARHGEF9O43307 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ARHGEF9O43307 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ARHGEF9O43307 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ARHGEF9O43307 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF9O43307 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF9O43307 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF9O43307 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF9O43307 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.11■□□□□ 0.97
ARHGEF9O43307 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF9O43307 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF9O43307 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.11■□□□□ 0.97
ARHGEF9O43307 KRT8P33-201ENST00000508125 1423 ntBASIC21.11■□□□□ 0.97
ARHGEF9O43307 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.11■□□□□ 0.97
ARHGEF9O43307 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ARHGEF9O43307 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF9O43307 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF9O43307 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF9O43307 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF9O43307 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF9O43307 AC010980.1-201ENST00000587192 1142 ntBASIC21.1■□□□□ 0.97
ARHGEF9O43307 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ARHGEF9O43307 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ARHGEF9O43307 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF9O43307 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF9O43307 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF9O43307 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ARHGEF9O43307 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARHGEF9O43307 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms