Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
UPK3BL1B0FP48 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
UPK3BL1B0FP48 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
UPK3BL1B0FP48 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
UPK3BL1B0FP48 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
UPK3BL1B0FP48 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
UPK3BL1B0FP48 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
UPK3BL1B0FP48 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
UPK3BL1B0FP48 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
UPK3BL1B0FP48 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.38■■□□□ 1.33
UPK3BL1B0FP48 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
UPK3BL1B0FP48 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
UPK3BL1B0FP48 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
UPK3BL1B0FP48 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
UPK3BL1B0FP48 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
UPK3BL1B0FP48 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
UPK3BL1B0FP48 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.37■■□□□ 1.33
UPK3BL1B0FP48 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
UPK3BL1B0FP48 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.36■■□□□ 1.33
UPK3BL1B0FP48 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
UPK3BL1B0FP48 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
UPK3BL1B0FP48 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
UPK3BL1B0FP48 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.36■■□□□ 1.33
UPK3BL1B0FP48 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
UPK3BL1B0FP48 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.36■■□□□ 1.33
UPK3BL1B0FP48 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.36■■□□□ 1.33
UPK3BL1B0FP48 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.36■■□□□ 1.33
UPK3BL1B0FP48 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
UPK3BL1B0FP48 MTDHP2-201ENST00000601468 714 ntBASIC23.36■■□□□ 1.33
UPK3BL1B0FP48 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.36■■□□□ 1.33
UPK3BL1B0FP48 MIR4466-201ENST00000606121 54 ntBASIC23.36■■□□□ 1.33
UPK3BL1B0FP48 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.36■■□□□ 1.33
UPK3BL1B0FP48 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
UPK3BL1B0FP48 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.36■■□□□ 1.33
UPK3BL1B0FP48 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
UPK3BL1B0FP48 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UPK3BL1B0FP48 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.35■■□□□ 1.33
UPK3BL1B0FP48 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.35■■□□□ 1.33
UPK3BL1B0FP48 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.35■■□□□ 1.33
UPK3BL1B0FP48 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.35■■□□□ 1.33
UPK3BL1B0FP48 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.35■■□□□ 1.33
UPK3BL1B0FP48 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.35■■□□□ 1.33
UPK3BL1B0FP48 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.35■■□□□ 1.33
UPK3BL1B0FP48 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.35■■□□□ 1.33
UPK3BL1B0FP48 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UPK3BL1B0FP48 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
UPK3BL1B0FP48 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
UPK3BL1B0FP48 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UPK3BL1B0FP48 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
UPK3BL1B0FP48 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
UPK3BL1B0FP48 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.34■■□□□ 1.33
UPK3BL1B0FP48 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
UPK3BL1B0FP48 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.34■■□□□ 1.33
UPK3BL1B0FP48 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
UPK3BL1B0FP48 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
UPK3BL1B0FP48 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.34■■□□□ 1.33
UPK3BL1B0FP48 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
UPK3BL1B0FP48 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.34■■□□□ 1.33
UPK3BL1B0FP48 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
UPK3BL1B0FP48 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.34■■□□□ 1.33
UPK3BL1B0FP48 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
UPK3BL1B0FP48 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.33■■□□□ 1.33
UPK3BL1B0FP48 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
UPK3BL1B0FP48 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
UPK3BL1B0FP48 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
UPK3BL1B0FP48 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
UPK3BL1B0FP48 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
UPK3BL1B0FP48 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
UPK3BL1B0FP48 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.33■■□□□ 1.33
UPK3BL1B0FP48 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.33■■□□□ 1.33
UPK3BL1B0FP48 AC022211.4-201ENST00000625094 2161 ntBASIC23.33■■□□□ 1.32
UPK3BL1B0FP48 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
UPK3BL1B0FP48 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
UPK3BL1B0FP48 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
UPK3BL1B0FP48 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
UPK3BL1B0FP48 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.31■■□□□ 1.32
UPK3BL1B0FP48 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.31■■□□□ 1.32
UPK3BL1B0FP48 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.31■■□□□ 1.32
UPK3BL1B0FP48 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.31■■□□□ 1.32
UPK3BL1B0FP48 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.31■■□□□ 1.32
UPK3BL1B0FP48 RARRES2P6-201ENST00000567333 442 ntBASIC23.31■■□□□ 1.32
UPK3BL1B0FP48 AL512631.2-201ENST00000604634 923 ntBASIC23.31■■□□□ 1.32
UPK3BL1B0FP48 AC092666.2-201ENST00000613287 246 ntBASIC23.31■■□□□ 1.32
UPK3BL1B0FP48 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
UPK3BL1B0FP48 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UPK3BL1B0FP48 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
UPK3BL1B0FP48 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
UPK3BL1B0FP48 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.3■■□□□ 1.32
UPK3BL1B0FP48 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.3■■□□□ 1.32
UPK3BL1B0FP48 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
UPK3BL1B0FP48 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
UPK3BL1B0FP48 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
UPK3BL1B0FP48 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.29■■□□□ 1.32
UPK3BL1B0FP48 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
UPK3BL1B0FP48 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.29■■□□□ 1.32
UPK3BL1B0FP48 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
UPK3BL1B0FP48 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.29■■□□□ 1.32
UPK3BL1B0FP48 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
UPK3BL1B0FP48 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.28■■□□□ 1.32
UPK3BL1B0FP48 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms