Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRRM4A7MD48 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SRRM4A7MD48 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRRM4A7MD48 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRRM4A7MD48 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SRRM4A7MD48 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRRM4A7MD48 ATP5G2P3-201ENST00000429083 425 ntBASIC18.59■□□□□ 0.57
SRRM4A7MD48 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.59■□□□□ 0.57
SRRM4A7MD48 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SRRM4A7MD48 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRRM4A7MD48 AC019171.1-201ENST00000601251 1056 ntBASIC18.59■□□□□ 0.57
SRRM4A7MD48 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SRRM4A7MD48 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SRRM4A7MD48 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SRRM4A7MD48 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SRRM4A7MD48 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SRRM4A7MD48 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.58■□□□□ 0.57
SRRM4A7MD48 AC139795.1-202ENST00000500444 432 ntBASIC18.58■□□□□ 0.56
SRRM4A7MD48 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SRRM4A7MD48 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SRRM4A7MD48 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SRRM4A7MD48 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SRRM4A7MD48 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SRRM4A7MD48 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.57■□□□□ 0.56
SRRM4A7MD48 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.57■□□□□ 0.56
SRRM4A7MD48 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRRM4A7MD48 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SRRM4A7MD48 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRRM4A7MD48 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.57■□□□□ 0.56
SRRM4A7MD48 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.57■□□□□ 0.56
SRRM4A7MD48 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SRRM4A7MD48 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.57■□□□□ 0.56
SRRM4A7MD48 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRRM4A7MD48 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SRRM4A7MD48 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.57■□□□□ 0.56
SRRM4A7MD48 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRRM4A7MD48 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SRRM4A7MD48 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.57■□□□□ 0.56
SRRM4A7MD48 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRRM4A7MD48 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRRM4A7MD48 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRRM4A7MD48 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.56■□□□□ 0.56
SRRM4A7MD48 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRRM4A7MD48 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRRM4A7MD48 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SRRM4A7MD48 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRRM4A7MD48 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SRRM4A7MD48 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRRM4A7MD48 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRRM4A7MD48 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.56■□□□□ 0.56
SRRM4A7MD48 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRRM4A7MD48 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM4A7MD48 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
SRRM4A7MD48 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM4A7MD48 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SRRM4A7MD48 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.55■□□□□ 0.56
SRRM4A7MD48 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM4A7MD48 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SRRM4A7MD48 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM4A7MD48 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.55■□□□□ 0.56
SRRM4A7MD48 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRRM4A7MD48 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM4A7MD48 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM4A7MD48 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM4A7MD48 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.54■□□□□ 0.56
SRRM4A7MD48 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM4A7MD48 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM4A7MD48 BHLHE23-202ENST00000612929 1109 ntBASIC18.54■□□□□ 0.56
SRRM4A7MD48 PVT1_1.1-201ENST00000615125 194 ntBASIC18.54■□□□□ 0.56
SRRM4A7MD48 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM4A7MD48 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM4A7MD48 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
SRRM4A7MD48 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM4A7MD48 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM4A7MD48 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRRM4A7MD48 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM4A7MD48 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.53■□□□□ 0.56
SRRM4A7MD48 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
SRRM4A7MD48 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM4A7MD48 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM4A7MD48 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM4A7MD48 TSPY13P-201ENST00000338964 914 ntBASIC18.53■□□□□ 0.56
SRRM4A7MD48 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.53■□□□□ 0.56
SRRM4A7MD48 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SRRM4A7MD48 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM4A7MD48 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.53■□□□□ 0.56
SRRM4A7MD48 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM4A7MD48 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM4A7MD48 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRRM4A7MD48 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SRRM4A7MD48 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRRM4A7MD48 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRRM4A7MD48 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.52■□□□□ 0.56
SRRM4A7MD48 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SRRM4A7MD48 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SRRM4A7MD48 AC022616.5-201ENST00000518796 181 ntBASIC18.52■□□□□ 0.56
SRRM4A7MD48 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.52■□□□□ 0.56
SRRM4A7MD48 AC011551.1-201ENST00000614101 683 ntBASIC18.52■□□□□ 0.56
SRRM4A7MD48 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRRM4A7MD48 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms