Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC36.15■■■■□ 3.38
PLEKHD1A6NEE1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC36.15■■■■□ 3.38
PLEKHD1A6NEE1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC36.15■■■■□ 3.38
PLEKHD1A6NEE1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC36.15■■■■□ 3.38
PLEKHD1A6NEE1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC36.15■■■■□ 3.38
PLEKHD1A6NEE1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC36.15■■■■□ 3.38
PLEKHD1A6NEE1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC36.15■■■■□ 3.38
PLEKHD1A6NEE1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC36.15■■■■□ 3.38
PLEKHD1A6NEE1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
PLEKHD1A6NEE1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC36.14■■■■□ 3.38
PLEKHD1A6NEE1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
PLEKHD1A6NEE1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
PLEKHD1A6NEE1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC36.14■■■■□ 3.38
PLEKHD1A6NEE1 REST-206ENST00000612429 1376 ntTSL 5 BASIC36.14■■■■□ 3.38
PLEKHD1A6NEE1 REST-207ENST00000616975 1370 ntTSL 5 BASIC36.14■■■■□ 3.38
PLEKHD1A6NEE1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC36.13■■■■□ 3.37
PLEKHD1A6NEE1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC36.13■■■■□ 3.37
PLEKHD1A6NEE1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC36.13■■■■□ 3.37
PLEKHD1A6NEE1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC36.12■■■■□ 3.37
PLEKHD1A6NEE1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
PLEKHD1A6NEE1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
PLEKHD1A6NEE1 AL162430.1-201ENST00000480705 870 ntBASIC36.11■■■■□ 3.37
PLEKHD1A6NEE1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC36.11■■■■□ 3.37
PLEKHD1A6NEE1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC36.11■■■■□ 3.37
PLEKHD1A6NEE1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC36.11■■■■□ 3.37
PLEKHD1A6NEE1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
PLEKHD1A6NEE1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
PLEKHD1A6NEE1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
PLEKHD1A6NEE1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
PLEKHD1A6NEE1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
PLEKHD1A6NEE1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC36.1■■■■□ 3.37
PLEKHD1A6NEE1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC36.09■■■■□ 3.37
PLEKHD1A6NEE1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC36.09■■■■□ 3.37
PLEKHD1A6NEE1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC36.09■■■■□ 3.37
PLEKHD1A6NEE1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC36.09■■■■□ 3.37
PLEKHD1A6NEE1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC36.09■■■■□ 3.37
PLEKHD1A6NEE1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC36.09■■■■□ 3.37
PLEKHD1A6NEE1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC36.09■■■■□ 3.37
PLEKHD1A6NEE1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC36.08■■■■□ 3.37
PLEKHD1A6NEE1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC36.08■■■■□ 3.37
PLEKHD1A6NEE1 AC099791.2-201ENST00000605725 427 ntBASIC36.08■■■■□ 3.37
PLEKHD1A6NEE1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
PLEKHD1A6NEE1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
PLEKHD1A6NEE1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC36.07■■■■□ 3.37
PLEKHD1A6NEE1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC36.07■■■■□ 3.37
PLEKHD1A6NEE1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.37
PLEKHD1A6NEE1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.36
PLEKHD1A6NEE1 AC027682.1-201ENST00000562846 899 ntBASIC36.07■■■■□ 3.36
PLEKHD1A6NEE1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC36.07■■■■□ 3.36
PLEKHD1A6NEE1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.36
PLEKHD1A6NEE1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
PLEKHD1A6NEE1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
PLEKHD1A6NEE1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC36.07■■■■□ 3.36
PLEKHD1A6NEE1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
PLEKHD1A6NEE1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
PLEKHD1A6NEE1 PTCHD3P2-201ENST00000424937 1205 ntBASIC36.06■■■■□ 3.36
PLEKHD1A6NEE1 AC011298.3-201ENST00000615796 283 ntBASIC36.06■■■■□ 3.36
PLEKHD1A6NEE1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC36.05■■■■□ 3.36
PLEKHD1A6NEE1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC36.05■■■■□ 3.36
PLEKHD1A6NEE1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC36.05■■■■□ 3.36
PLEKHD1A6NEE1 AL138724.1-201ENST00000606771 1088 ntBASIC36.05■■■■□ 3.36
PLEKHD1A6NEE1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC36.04■■■■□ 3.36
PLEKHD1A6NEE1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC36.04■■■■□ 3.36
PLEKHD1A6NEE1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
PLEKHD1A6NEE1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC36.04■■■■□ 3.36
PLEKHD1A6NEE1 AC131274.2-201ENST00000580697 1507 ntBASIC36.03■■■■□ 3.36
PLEKHD1A6NEE1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
PLEKHD1A6NEE1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC36.03■■■■□ 3.36
PLEKHD1A6NEE1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
PLEKHD1A6NEE1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC36.03■■■■□ 3.36
PLEKHD1A6NEE1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
PLEKHD1A6NEE1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
PLEKHD1A6NEE1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC36.02■■■■□ 3.36
PLEKHD1A6NEE1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC36.02■■■■□ 3.36
PLEKHD1A6NEE1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC36.02■■■■□ 3.36
PLEKHD1A6NEE1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC36.02■■■■□ 3.36
PLEKHD1A6NEE1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC36.01■■■■□ 3.36
PLEKHD1A6NEE1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC36.01■■■■□ 3.36
PLEKHD1A6NEE1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC36.01■■■■□ 3.36
PLEKHD1A6NEE1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC36.01■■■■□ 3.36
PLEKHD1A6NEE1 IRS3P-201ENST00000223076 1006 ntBASIC36■■■■□ 3.35
PLEKHD1A6NEE1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC36■■■■□ 3.35
PLEKHD1A6NEE1 AC008764.7-201ENST00000593779 1081 ntBASIC36■■■■□ 3.35
PLEKHD1A6NEE1 AC010501.1-201ENST00000606270 1962 ntBASIC36■■■■□ 3.35
PLEKHD1A6NEE1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC35.99■■■■□ 3.35
PLEKHD1A6NEE1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC35.99■■■■□ 3.35
PLEKHD1A6NEE1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC35.99■■■■□ 3.35
PLEKHD1A6NEE1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC35.99■■■■□ 3.35
PLEKHD1A6NEE1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC35.98■■■■□ 3.35
PLEKHD1A6NEE1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC35.98■■■■□ 3.35
PLEKHD1A6NEE1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
PLEKHD1A6NEE1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC35.97■■■■□ 3.35
PLEKHD1A6NEE1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC35.97■■■■□ 3.35
PLEKHD1A6NEE1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
PLEKHD1A6NEE1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC35.97■■■■□ 3.35
PLEKHD1A6NEE1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC35.97■■■■□ 3.35
PLEKHD1A6NEE1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC35.97■■■■□ 3.35
PLEKHD1A6NEE1 AC009102.2-201ENST00000606772 1639 ntBASIC35.97■■■■□ 3.35
PLEKHD1A6NEE1 AC099791.1-201ENST00000416440 715 ntBASIC35.96■■■■□ 3.35
PLEKHD1A6NEE1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms