Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SBNO1A3KN83 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SBNO1A3KN83 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SBNO1A3KN83 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SBNO1A3KN83 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SBNO1A3KN83 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC31.78■■■□□ 2.68
SBNO1A3KN83 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
SBNO1A3KN83 AC096887.2-201ENST00000623443 1957 ntBASIC31.77■■■□□ 2.68
SBNO1A3KN83 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.77■■■□□ 2.68
SBNO1A3KN83 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SBNO1A3KN83 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
SBNO1A3KN83 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
SBNO1A3KN83 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
SBNO1A3KN83 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SBNO1A3KN83 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
SBNO1A3KN83 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SBNO1A3KN83 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
SBNO1A3KN83 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
SBNO1A3KN83 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC31.75■■■□□ 2.67
SBNO1A3KN83 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC31.75■■■□□ 2.67
SBNO1A3KN83 AC011298.3-201ENST00000615796 283 ntBASIC31.75■■■□□ 2.67
SBNO1A3KN83 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
SBNO1A3KN83 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
SBNO1A3KN83 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SBNO1A3KN83 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC31.74■■■□□ 2.67
SBNO1A3KN83 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC31.74■■■□□ 2.67
SBNO1A3KN83 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.74■■■□□ 2.67
SBNO1A3KN83 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC31.73■■■□□ 2.67
SBNO1A3KN83 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
SBNO1A3KN83 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC31.73■■■□□ 2.67
SBNO1A3KN83 AL138724.1-201ENST00000606771 1088 ntBASIC31.73■■■□□ 2.67
SBNO1A3KN83 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
SBNO1A3KN83 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
SBNO1A3KN83 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SBNO1A3KN83 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SBNO1A3KN83 PTCHD3P2-201ENST00000424937 1205 ntBASIC31.72■■■□□ 2.67
SBNO1A3KN83 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SBNO1A3KN83 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.72■■■□□ 2.67
SBNO1A3KN83 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC31.71■■■□□ 2.67
SBNO1A3KN83 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC31.71■■■□□ 2.67
SBNO1A3KN83 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC31.71■■■□□ 2.67
SBNO1A3KN83 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
SBNO1A3KN83 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
SBNO1A3KN83 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC31.71■■■□□ 2.67
SBNO1A3KN83 ERN1-208ENST00000606895 2068 ntBASIC31.71■■■□□ 2.67
SBNO1A3KN83 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
SBNO1A3KN83 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
SBNO1A3KN83 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SBNO1A3KN83 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC31.7■■■□□ 2.67
SBNO1A3KN83 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
SBNO1A3KN83 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
SBNO1A3KN83 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SBNO1A3KN83 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC31.69■■■□□ 2.66
SBNO1A3KN83 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC31.69■■■□□ 2.66
SBNO1A3KN83 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.68■■■□□ 2.66
SBNO1A3KN83 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SBNO1A3KN83 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SBNO1A3KN83 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
SBNO1A3KN83 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
SBNO1A3KN83 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC31.68■■■□□ 2.66
SBNO1A3KN83 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC31.68■■■□□ 2.66
SBNO1A3KN83 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC31.68■■■□□ 2.66
SBNO1A3KN83 IRS3P-201ENST00000223076 1006 ntBASIC31.68■■■□□ 2.66
SBNO1A3KN83 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SBNO1A3KN83 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC31.68■■■□□ 2.66
SBNO1A3KN83 AC097639.1-201ENST00000565519 1891 ntBASIC31.67■■■□□ 2.66
SBNO1A3KN83 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SBNO1A3KN83 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
SBNO1A3KN83 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SBNO1A3KN83 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC31.67■■■□□ 2.66
SBNO1A3KN83 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SBNO1A3KN83 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SBNO1A3KN83 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SBNO1A3KN83 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SBNO1A3KN83 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
SBNO1A3KN83 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.66■■■□□ 2.66
SBNO1A3KN83 JTB-203ENST00000368589 1216 ntTSL 2 BASIC31.66■■■□□ 2.66
SBNO1A3KN83 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC31.66■■■□□ 2.66
SBNO1A3KN83 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC31.66■■■□□ 2.66
SBNO1A3KN83 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC31.65■■■□□ 2.66
SBNO1A3KN83 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
SBNO1A3KN83 AC099791.2-201ENST00000605725 427 ntBASIC31.65■■■□□ 2.66
SBNO1A3KN83 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
SBNO1A3KN83 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SBNO1A3KN83 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SBNO1A3KN83 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
SBNO1A3KN83 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC31.64■■■□□ 2.66
SBNO1A3KN83 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
SBNO1A3KN83 RHOF-204ENST00000537265 699 ntTSL 2 BASIC31.64■■■□□ 2.66
SBNO1A3KN83 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
SBNO1A3KN83 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
SBNO1A3KN83 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.63■■■□□ 2.65
SBNO1A3KN83 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SBNO1A3KN83 AC099791.1-201ENST00000416440 715 ntBASIC31.63■■■□□ 2.65
SBNO1A3KN83 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SBNO1A3KN83 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SBNO1A3KN83 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC31.63■■■□□ 2.65
SBNO1A3KN83 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC31.63■■■□□ 2.65
SBNO1A3KN83 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SBNO1A3KN83 AC010501.1-201ENST00000606270 1962 ntBASIC31.63■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms