Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SMIM35A0A1B0GVV1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
SMIM35A0A1B0GVV1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SMIM35A0A1B0GVV1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.5■■□□□ 1.67
SMIM35A0A1B0GVV1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.5■■□□□ 1.67
SMIM35A0A1B0GVV1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SMIM35A0A1B0GVV1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.5■■□□□ 1.67
SMIM35A0A1B0GVV1 AC005703.6-201ENST00000623265 1329 ntBASIC25.5■■□□□ 1.67
SMIM35A0A1B0GVV1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
SMIM35A0A1B0GVV1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.49■■□□□ 1.67
SMIM35A0A1B0GVV1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
SMIM35A0A1B0GVV1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SMIM35A0A1B0GVV1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.67
SMIM35A0A1B0GVV1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SMIM35A0A1B0GVV1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.48■■□□□ 1.67
SMIM35A0A1B0GVV1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SMIM35A0A1B0GVV1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SMIM35A0A1B0GVV1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SMIM35A0A1B0GVV1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.48■■□□□ 1.67
SMIM35A0A1B0GVV1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.48■■□□□ 1.67
SMIM35A0A1B0GVV1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SMIM35A0A1B0GVV1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMIM35A0A1B0GVV1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMIM35A0A1B0GVV1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SMIM35A0A1B0GVV1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.47■■□□□ 1.67
SMIM35A0A1B0GVV1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.47■■□□□ 1.67
SMIM35A0A1B0GVV1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.47■■□□□ 1.67
SMIM35A0A1B0GVV1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SMIM35A0A1B0GVV1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.47■■□□□ 1.67
SMIM35A0A1B0GVV1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.47■■□□□ 1.67
SMIM35A0A1B0GVV1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMIM35A0A1B0GVV1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.46■■□□□ 1.67
SMIM35A0A1B0GVV1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.46■■□□□ 1.67
SMIM35A0A1B0GVV1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
SMIM35A0A1B0GVV1 AC133561.4-201ENST00000566112 224 ntBASIC25.46■■□□□ 1.67
SMIM35A0A1B0GVV1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMIM35A0A1B0GVV1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMIM35A0A1B0GVV1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SMIM35A0A1B0GVV1 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.45■■□□□ 1.67
SMIM35A0A1B0GVV1 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.45■■□□□ 1.67
SMIM35A0A1B0GVV1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
SMIM35A0A1B0GVV1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMIM35A0A1B0GVV1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.45■■□□□ 1.66
SMIM35A0A1B0GVV1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.45■■□□□ 1.66
SMIM35A0A1B0GVV1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
SMIM35A0A1B0GVV1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SMIM35A0A1B0GVV1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SMIM35A0A1B0GVV1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
SMIM35A0A1B0GVV1 AC005837.3-201ENST00000612163 286 ntBASIC25.44■■□□□ 1.66
SMIM35A0A1B0GVV1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.44■■□□□ 1.66
SMIM35A0A1B0GVV1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SMIM35A0A1B0GVV1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SMIM35A0A1B0GVV1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SMIM35A0A1B0GVV1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SMIM35A0A1B0GVV1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SMIM35A0A1B0GVV1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.43■■□□□ 1.66
SMIM35A0A1B0GVV1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SMIM35A0A1B0GVV1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
SMIM35A0A1B0GVV1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.42■■□□□ 1.66
SMIM35A0A1B0GVV1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SMIM35A0A1B0GVV1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.42■■□□□ 1.66
SMIM35A0A1B0GVV1 SRD5A1P1-201ENST00000442297 786 ntBASIC25.42■■□□□ 1.66
SMIM35A0A1B0GVV1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SMIM35A0A1B0GVV1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
SMIM35A0A1B0GVV1 AL022069.1-201ENST00000568025 1636 ntBASIC25.41■■□□□ 1.66
SMIM35A0A1B0GVV1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SMIM35A0A1B0GVV1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SMIM35A0A1B0GVV1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SMIM35A0A1B0GVV1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SMIM35A0A1B0GVV1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SMIM35A0A1B0GVV1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
SMIM35A0A1B0GVV1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.41■■□□□ 1.66
SMIM35A0A1B0GVV1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SMIM35A0A1B0GVV1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.41■■□□□ 1.66
SMIM35A0A1B0GVV1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SMIM35A0A1B0GVV1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.41■■□□□ 1.66
SMIM35A0A1B0GVV1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
SMIM35A0A1B0GVV1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.4■■□□□ 1.66
SMIM35A0A1B0GVV1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.4■■□□□ 1.66
SMIM35A0A1B0GVV1 AC106739.1-201ENST00000617035 715 ntBASIC25.4■■□□□ 1.66
SMIM35A0A1B0GVV1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SMIM35A0A1B0GVV1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMIM35A0A1B0GVV1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMIM35A0A1B0GVV1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMIM35A0A1B0GVV1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
SMIM35A0A1B0GVV1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SMIM35A0A1B0GVV1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SMIM35A0A1B0GVV1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
SMIM35A0A1B0GVV1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SMIM35A0A1B0GVV1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SMIM35A0A1B0GVV1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SMIM35A0A1B0GVV1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SMIM35A0A1B0GVV1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SMIM35A0A1B0GVV1 UNC93B3-201ENST00000308076 687 ntBASIC25.38■■□□□ 1.65
SMIM35A0A1B0GVV1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SMIM35A0A1B0GVV1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SMIM35A0A1B0GVV1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
SMIM35A0A1B0GVV1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.38■■□□□ 1.65
SMIM35A0A1B0GVV1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SMIM35A0A1B0GVV1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms