Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC163A0A0D9SF12 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.14■■□□□ 1.29
CCDC163A0A0D9SF12 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC163A0A0D9SF12 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.14■■□□□ 1.29
CCDC163A0A0D9SF12 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.14■■□□□ 1.29
CCDC163A0A0D9SF12 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.14■■□□□ 1.29
CCDC163A0A0D9SF12 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.14■■□□□ 1.29
CCDC163A0A0D9SF12 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC163A0A0D9SF12 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC163A0A0D9SF12 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC163A0A0D9SF12 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC163A0A0D9SF12 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC163A0A0D9SF12 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CCDC163A0A0D9SF12 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC163A0A0D9SF12 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC163A0A0D9SF12 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC163A0A0D9SF12 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.13■■□□□ 1.29
CCDC163A0A0D9SF12 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.13■■□□□ 1.29
CCDC163A0A0D9SF12 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.13■■□□□ 1.29
CCDC163A0A0D9SF12 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC163A0A0D9SF12 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC163A0A0D9SF12 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.12■■□□□ 1.29
CCDC163A0A0D9SF12 AC142086.6-201ENST00000621154 1765 ntBASIC23.12■■□□□ 1.29
CCDC163A0A0D9SF12 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC163A0A0D9SF12 AC099791.2-201ENST00000605725 427 ntBASIC23.12■■□□□ 1.29
CCDC163A0A0D9SF12 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC163A0A0D9SF12 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CCDC163A0A0D9SF12 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC163A0A0D9SF12 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
CCDC163A0A0D9SF12 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC163A0A0D9SF12 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CCDC163A0A0D9SF12 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.11■■□□□ 1.29
CCDC163A0A0D9SF12 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.11■■□□□ 1.29
CCDC163A0A0D9SF12 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CCDC163A0A0D9SF12 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC163A0A0D9SF12 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC163A0A0D9SF12 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC163A0A0D9SF12 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.1■■□□□ 1.29
CCDC163A0A0D9SF12 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC163A0A0D9SF12 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC163A0A0D9SF12 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.1■■□□□ 1.29
CCDC163A0A0D9SF12 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.1■■□□□ 1.29
CCDC163A0A0D9SF12 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCDC163A0A0D9SF12 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CCDC163A0A0D9SF12 AC096887.2-201ENST00000623443 1957 ntBASIC23.09■■□□□ 1.29
CCDC163A0A0D9SF12 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CCDC163A0A0D9SF12 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCDC163A0A0D9SF12 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.09■■□□□ 1.29
CCDC163A0A0D9SF12 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.09■■□□□ 1.29
CCDC163A0A0D9SF12 AC008764.7-201ENST00000593779 1081 ntBASIC23.09■■□□□ 1.29
CCDC163A0A0D9SF12 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CCDC163A0A0D9SF12 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.09■■□□□ 1.29
CCDC163A0A0D9SF12 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCDC163A0A0D9SF12 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CCDC163A0A0D9SF12 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.09■■□□□ 1.29
CCDC163A0A0D9SF12 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CCDC163A0A0D9SF12 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.08■■□□□ 1.29
CCDC163A0A0D9SF12 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCDC163A0A0D9SF12 AC099791.1-201ENST00000416440 715 ntBASIC23.08■■□□□ 1.29
CCDC163A0A0D9SF12 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.08■■□□□ 1.29
CCDC163A0A0D9SF12 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CCDC163A0A0D9SF12 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.08■■□□□ 1.29
CCDC163A0A0D9SF12 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CCDC163A0A0D9SF12 AC136469.2-201ENST00000623944 1028 ntBASIC23.08■■□□□ 1.29
CCDC163A0A0D9SF12 AC241377.3-202ENST00000626088 1088 ntBASIC23.08■■□□□ 1.29
CCDC163A0A0D9SF12 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.08■■□□□ 1.29
CCDC163A0A0D9SF12 AC241585.3-202ENST00000628937 1088 ntBASIC23.08■■□□□ 1.29
CCDC163A0A0D9SF12 AC245100.8-202ENST00000629247 1058 ntBASIC23.08■■□□□ 1.29
CCDC163A0A0D9SF12 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC163A0A0D9SF12 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.06■■□□□ 1.28
CCDC163A0A0D9SF12 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC163A0A0D9SF12 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC163A0A0D9SF12 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.06■■□□□ 1.28
CCDC163A0A0D9SF12 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.06■■□□□ 1.28
CCDC163A0A0D9SF12 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.06■■□□□ 1.28
CCDC163A0A0D9SF12 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC163A0A0D9SF12 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC163A0A0D9SF12 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC163A0A0D9SF12 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.06■■□□□ 1.28
CCDC163A0A0D9SF12 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CCDC163A0A0D9SF12 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC163A0A0D9SF12 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.05■■□□□ 1.28
CCDC163A0A0D9SF12 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
CCDC163A0A0D9SF12 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC163A0A0D9SF12 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCDC163A0A0D9SF12 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CCDC163A0A0D9SF12 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.04■■□□□ 1.28
CCDC163A0A0D9SF12 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.04■■□□□ 1.28
CCDC163A0A0D9SF12 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.04■■□□□ 1.28
CCDC163A0A0D9SF12 AC009102.2-201ENST00000606772 1639 ntBASIC23.04■■□□□ 1.28
CCDC163A0A0D9SF12 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.04■■□□□ 1.28
CCDC163A0A0D9SF12 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.04■■□□□ 1.28
CCDC163A0A0D9SF12 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC163A0A0D9SF12 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CCDC163A0A0D9SF12 AC131274.2-201ENST00000580697 1507 ntBASIC23.03■■□□□ 1.28
CCDC163A0A0D9SF12 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CCDC163A0A0D9SF12 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC163A0A0D9SF12 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.02■■□□□ 1.28
CCDC163A0A0D9SF12 BX842568.3-201ENST00000418104 571 ntBASIC23.02■■□□□ 1.28
CCDC163A0A0D9SF12 AC233992.3-201ENST00000607491 485 ntBASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms