Protein–RNA interactions for Protein: A0A0C4DH55

IGKV3D-7, Immunoglobulin kappa variable 3D-7, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-7A0A0C4DH55 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGKV3D-7A0A0C4DH55 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
IGKV3D-7A0A0C4DH55 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
IGKV3D-7A0A0C4DH55 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
IGKV3D-7A0A0C4DH55 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC14.47□□□□□ -0.09
IGKV3D-7A0A0C4DH55 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGKV3D-7A0A0C4DH55 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC14.47□□□□□ -0.09
IGKV3D-7A0A0C4DH55 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC14.47□□□□□ -0.09
IGKV3D-7A0A0C4DH55 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGKV3D-7A0A0C4DH55 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
IGKV3D-7A0A0C4DH55 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGKV3D-7A0A0C4DH55 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IGKV3D-7A0A0C4DH55 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
IGKV3D-7A0A0C4DH55 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
IGKV3D-7A0A0C4DH55 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGKV3D-7A0A0C4DH55 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.46□□□□□ -0.09
IGKV3D-7A0A0C4DH55 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
IGKV3D-7A0A0C4DH55 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGKV3D-7A0A0C4DH55 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
IGKV3D-7A0A0C4DH55 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGKV3D-7A0A0C4DH55 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGKV3D-7A0A0C4DH55 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC14.46□□□□□ -0.09
IGKV3D-7A0A0C4DH55 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGKV3D-7A0A0C4DH55 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IGKV3D-7A0A0C4DH55 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
IGKV3D-7A0A0C4DH55 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
IGKV3D-7A0A0C4DH55 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
IGKV3D-7A0A0C4DH55 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
IGKV3D-7A0A0C4DH55 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
IGKV3D-7A0A0C4DH55 AP003733.4-201ENST00000623785 1697 ntBASIC14.46□□□□□ -0.1
IGKV3D-7A0A0C4DH55 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGKV3D-7A0A0C4DH55 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC14.45□□□□□ -0.1
IGKV3D-7A0A0C4DH55 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.45□□□□□ -0.1
IGKV3D-7A0A0C4DH55 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
IGKV3D-7A0A0C4DH55 FOXO3B-201ENST00000395675 1928 ntBASIC14.45□□□□□ -0.1
IGKV3D-7A0A0C4DH55 LINC00526-201ENST00000581067 1875 ntBASIC14.45□□□□□ -0.1
IGKV3D-7A0A0C4DH55 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.45□□□□□ -0.1
IGKV3D-7A0A0C4DH55 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGKV3D-7A0A0C4DH55 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.45□□□□□ -0.1
IGKV3D-7A0A0C4DH55 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGKV3D-7A0A0C4DH55 AC127502.1-201ENST00000399971 1502 ntBASIC14.45□□□□□ -0.1
IGKV3D-7A0A0C4DH55 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC14.45□□□□□ -0.1
IGKV3D-7A0A0C4DH55 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IGKV3D-7A0A0C4DH55 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC14.45□□□□□ -0.1
IGKV3D-7A0A0C4DH55 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
IGKV3D-7A0A0C4DH55 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
IGKV3D-7A0A0C4DH55 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
IGKV3D-7A0A0C4DH55 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-7A0A0C4DH55 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-7A0A0C4DH55 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
IGKV3D-7A0A0C4DH55 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.44□□□□□ -0.1
IGKV3D-7A0A0C4DH55 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-7A0A0C4DH55 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-7A0A0C4DH55 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-7A0A0C4DH55 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IGKV3D-7A0A0C4DH55 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 AC127496.7-201ENST00000625110 1798 ntBASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IGKV3D-7A0A0C4DH55 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGKV3D-7A0A0C4DH55 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGKV3D-7A0A0C4DH55 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
IGKV3D-7A0A0C4DH55 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
IGKV3D-7A0A0C4DH55 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGKV3D-7A0A0C4DH55 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
IGKV3D-7A0A0C4DH55 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
IGKV3D-7A0A0C4DH55 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IGKV3D-7A0A0C4DH55 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
IGKV3D-7A0A0C4DH55 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
IGKV3D-7A0A0C4DH55 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC14.42□□□□□ -0.1
IGKV3D-7A0A0C4DH55 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGKV3D-7A0A0C4DH55 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGKV3D-7A0A0C4DH55 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC14.41□□□□□ -0.1
IGKV3D-7A0A0C4DH55 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGKV3D-7A0A0C4DH55 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
IGKV3D-7A0A0C4DH55 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC14.41□□□□□ -0.1
IGKV3D-7A0A0C4DH55 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
IGKV3D-7A0A0C4DH55 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGKV3D-7A0A0C4DH55 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
IGKV3D-7A0A0C4DH55 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGKV3D-7A0A0C4DH55 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGKV3D-7A0A0C4DH55 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
IGKV3D-7A0A0C4DH55 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.41□□□□□ -0.1
IGKV3D-7A0A0C4DH55 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
IGKV3D-7A0A0C4DH55 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
IGKV3D-7A0A0C4DH55 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms