Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.03■■□□□ 1.28
MSANTD3-TMEFF1A0A0A6YYJ0 MIR4767-201ENST00000582827 78 ntBASIC23.03■■□□□ 1.28
MSANTD3-TMEFF1A0A0A6YYJ0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.03■■□□□ 1.28
MSANTD3-TMEFF1A0A0A6YYJ0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
MSANTD3-TMEFF1A0A0A6YYJ0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.02■■□□□ 1.28
MSANTD3-TMEFF1A0A0A6YYJ0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
MSANTD3-TMEFF1A0A0A6YYJ0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
MSANTD3-TMEFF1A0A0A6YYJ0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
MSANTD3-TMEFF1A0A0A6YYJ0 AC091305.1-201ENST00000479476 895 ntBASIC23.02■■□□□ 1.28
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.02■■□□□ 1.28
MSANTD3-TMEFF1A0A0A6YYJ0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.02■■□□□ 1.28
MSANTD3-TMEFF1A0A0A6YYJ0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
MSANTD3-TMEFF1A0A0A6YYJ0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.01■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.01■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.01■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.01■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.01■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 MAG-206ENST00000597035 542 ntTSL 4 BASIC23■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 AC092171.4-201ENST00000609130 632 ntBASIC23■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.99■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.99■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.99■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 SERBP1P1-201ENST00000396021 1160 ntBASIC22.98■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.98■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.98■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 MIR6821-201ENST00000617625 74 ntBASIC22.98■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.98■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 AC099791.2-201ENST00000605725 427 ntBASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 CA15P2-201ENST00000611168 834 ntBASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 AC010501.1-201ENST00000606270 1962 ntBASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
MSANTD3-TMEFF1A0A0A6YYJ0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.95■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 RASA4CP-201ENST00000424092 1398 ntBASIC22.95■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 AC097381.1-201ENST00000429019 1296 ntBASIC22.95■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.95■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 AC087623.3-201ENST00000607047 1098 ntBASIC22.95■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.94■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.94■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.93■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.93■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 AC008764.7-201ENST00000593779 1081 ntBASIC22.93■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.92■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
MSANTD3-TMEFF1A0A0A6YYJ0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms