Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV20-1A0A075B6N2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRBV20-1A0A075B6N2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV20-1A0A075B6N2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV20-1A0A075B6N2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV20-1A0A075B6N2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV20-1A0A075B6N2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV20-1A0A075B6N2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRBV20-1A0A075B6N2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV20-1A0A075B6N2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRBV20-1A0A075B6N2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV20-1A0A075B6N2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TRBV20-1A0A075B6N2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV20-1A0A075B6N2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV20-1A0A075B6N2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV20-1A0A075B6N2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV20-1A0A075B6N2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRBV20-1A0A075B6N2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRBV20-1A0A075B6N2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV20-1A0A075B6N2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV20-1A0A075B6N2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV20-1A0A075B6N2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV20-1A0A075B6N2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRBV20-1A0A075B6N2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV20-1A0A075B6N2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC15.47■□□□□ 0.07
TRBV20-1A0A075B6N2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
TRBV20-1A0A075B6N2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
TRBV20-1A0A075B6N2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV20-1A0A075B6N2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV20-1A0A075B6N2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC15.46■□□□□ 0.07
TRBV20-1A0A075B6N2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
TRBV20-1A0A075B6N2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV20-1A0A075B6N2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC15.46■□□□□ 0.07
TRBV20-1A0A075B6N2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV20-1A0A075B6N2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TRBV20-1A0A075B6N2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.46■□□□□ 0.07
TRBV20-1A0A075B6N2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRBV20-1A0A075B6N2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV20-1A0A075B6N2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.45■□□□□ 0.06
TRBV20-1A0A075B6N2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV20-1A0A075B6N2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRBV20-1A0A075B6N2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
TRBV20-1A0A075B6N2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV20-1A0A075B6N2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRBV20-1A0A075B6N2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV20-1A0A075B6N2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV20-1A0A075B6N2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV20-1A0A075B6N2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV20-1A0A075B6N2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV20-1A0A075B6N2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV20-1A0A075B6N2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV20-1A0A075B6N2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV20-1A0A075B6N2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV20-1A0A075B6N2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRBV20-1A0A075B6N2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV20-1A0A075B6N2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV20-1A0A075B6N2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.43■□□□□ 0.06
TRBV20-1A0A075B6N2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV20-1A0A075B6N2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV20-1A0A075B6N2 AL391422.3-201ENST00000603791 2761 ntBASIC15.42■□□□□ 0.06
TRBV20-1A0A075B6N2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV20-1A0A075B6N2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRBV20-1A0A075B6N2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV20-1A0A075B6N2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRBV20-1A0A075B6N2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
TRBV20-1A0A075B6N2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
TRBV20-1A0A075B6N2 AC073130.3-201ENST00000624389 2278 ntBASIC15.42■□□□□ 0.06
TRBV20-1A0A075B6N2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV20-1A0A075B6N2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV20-1A0A075B6N2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRBV20-1A0A075B6N2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV20-1A0A075B6N2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV20-1A0A075B6N2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV20-1A0A075B6N2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV20-1A0A075B6N2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC15.41■□□□□ 0.06
TRBV20-1A0A075B6N2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms