Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 AC138749.3-201ENST00000567691 622 ntBASIC17.49■□□□□ 0.39
CLIC4Q9Y696 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 AC116165.1-201ENST00000611806 668 ntBASIC17.49■□□□□ 0.39
CLIC4Q9Y696 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CLIC4Q9Y696 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 DRD5P1-201ENST00000456605 1438 ntBASIC17.48■□□□□ 0.39
CLIC4Q9Y696 INTS4P1-203ENST00000641008 3683 ntBASIC17.48■□□□□ 0.39
CLIC4Q9Y696 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 AC004066.1-201ENST00000502488 802 ntBASIC17.48■□□□□ 0.39
CLIC4Q9Y696 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 AC005498.2-205ENST00000593218 784 ntBASIC17.48■□□□□ 0.39
CLIC4Q9Y696 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 AC068587.6-202ENST00000641839 5619 ntBASIC17.48■□□□□ 0.39
CLIC4Q9Y696 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLIC4Q9Y696 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 FAM86LP-201ENST00000478302 853 ntBASIC17.47■□□□□ 0.39
CLIC4Q9Y696 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.47■□□□□ 0.39
CLIC4Q9Y696 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.47■□□□□ 0.39
CLIC4Q9Y696 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.47■□□□□ 0.39
CLIC4Q9Y696 AL662799.1-202ENST00000614205 422 ntBASIC17.47■□□□□ 0.39
CLIC4Q9Y696 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.47■□□□□ 0.39
CLIC4Q9Y696 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLIC4Q9Y696 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms