Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB7Q9Y5E2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHB7Q9Y5E2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHB7Q9Y5E2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB7Q9Y5E2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHB7Q9Y5E2 KRT8P29-201ENST00000420409 1371 ntBASIC16.38■□□□□ 0.21
PCDHB7Q9Y5E2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHB7Q9Y5E2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB7Q9Y5E2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHB7Q9Y5E2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 AL133466.1-201ENST00000447582 150 ntBASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 AC026434.2-201ENST00000506094 1078 ntBASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 RN7SL190P-201ENST00000582519 257 ntBASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 CU633904.3-201ENST00000624042 1029 ntBASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 AL360270.3-201ENST00000609118 1348 ntBASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB7Q9Y5E2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 Z97180.1-201ENST00000445173 988 ntBASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 RN7SL769P-201ENST00000469386 295 ntBASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 AC015967.2-201ENST00000624092 234 ntBASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 AC006435.4-201ENST00000625037 234 ntBASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 AL356737.1-201ENST00000634391 234 ntBASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 AC009090.5-201ENST00000624886 2285 ntBASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 AL139384.1-201ENST00000612143 3047 ntBASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB7Q9Y5E2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHB7Q9Y5E2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB7Q9Y5E2 AL157414.3-201ENST00000624276 1954 ntBASIC16.35■□□□□ 0.21
PCDHB7Q9Y5E2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB7Q9Y5E2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB7Q9Y5E2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB7Q9Y5E2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB7Q9Y5E2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB7Q9Y5E2 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB7Q9Y5E2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB7Q9Y5E2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB7Q9Y5E2 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB7Q9Y5E2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB7Q9Y5E2 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
PCDHB7Q9Y5E2 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB7Q9Y5E2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB7Q9Y5E2 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms