Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 AC098859.1-201ENST00000502915 1238 ntBASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 SLC25A39P2-201ENST00000537614 270 ntBASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 LINC01225-203ENST00000563550 1244 ntBASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 AC073389.1-201ENST00000595595 795 ntBASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 KRT18P28-201ENST00000453838 1332 ntBASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
R3HCC1Q9Y3T6 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 AC093724.1-201ENST00000448659 1027 ntBASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 AC024267.1-201ENST00000582320 895 ntBASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 AC009093.7-201ENST00000623853 1223 ntBASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC17.68■□□□□ 0.42
R3HCC1Q9Y3T6 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 MIR346-201ENST00000362234 95 ntBASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3HCC1Q9Y3T6 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms