Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 PIN1P1-201ENST00000412108 996 ntBASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 MYCLP2-201ENST00000449268 967 ntBASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 AC190387.1-201ENST00000551683 408 ntBASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 AC093813.1-201ENST00000605066 256 ntBASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 AJ011931.1-201ENST00000618749 2492 ntBASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
AP4E1Q9UPM8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 C1QBPP1-201ENST00000400117 770 ntBASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 AC124283.3-201ENST00000570869 594 ntBASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 AC140912.1-201ENST00000577171 1054 ntBASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4E1Q9UPM8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 AL158070.2-201ENST00000623713 1621 ntBASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.9■□□□□ 0.14
AP4E1Q9UPM8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms