Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 BNIP3P29-201ENST00000598302 571 ntBASIC16.14■□□□□ 0.17
CDH9Q9ULB4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 AC011447.5-201ENST00000616168 564 ntBASIC16.14■□□□□ 0.17
CDH9Q9ULB4 AC006453.4-201ENST00000636949 1252 ntBASIC16.14■□□□□ 0.17
CDH9Q9ULB4 AC008687.7-202ENST00000637404 953 ntBASIC16.14■□□□□ 0.17
CDH9Q9ULB4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 PPT1-215ENST00000641471 2368 ntBASIC16.14■□□□□ 0.17
CDH9Q9ULB4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH9Q9ULB4 AC022532.1-201ENST00000624563 1728 ntBASIC16.14■□□□□ 0.17
CDH9Q9ULB4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 AL590640.2-201ENST00000457038 527 ntBASIC16.13■□□□□ 0.17
CDH9Q9ULB4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 ECM1P1-201ENST00000604092 1279 ntBASIC16.13■□□□□ 0.17
CDH9Q9ULB4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH9Q9ULB4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 AP000845.1-201ENST00000581677 2131 ntBASIC16.12■□□□□ 0.17
CDH9Q9ULB4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 AC068587.6-202ENST00000641839 5619 ntBASIC16.12■□□□□ 0.17
CDH9Q9ULB4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 AC023310.1-201ENST00000554836 735 ntBASIC16.12■□□□□ 0.17
CDH9Q9ULB4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.12■□□□□ 0.17
CDH9Q9ULB4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 AHCYP2-201ENST00000430630 1300 ntBASIC16.12■□□□□ 0.17
CDH9Q9ULB4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 AL359258.3-201ENST00000622910 2331 ntBASIC16.12■□□□□ 0.17
CDH9Q9ULB4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH9Q9ULB4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms