Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 AL008718.2-201ENST00000609206 1313 ntBASIC17.24■□□□□ 0.35
CPA4Q9UI42 AC074138.1-201ENST00000611182 1303 ntBASIC17.24■□□□□ 0.35
CPA4Q9UI42 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 AP000356.3-201ENST00000382243 753 ntBASIC17.24■□□□□ 0.35
CPA4Q9UI42 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 RPS9P1-201ENST00000419943 583 ntBASIC17.24■□□□□ 0.35
CPA4Q9UI42 RPL8P2-201ENST00000430538 502 ntBASIC17.24■□□□□ 0.35
CPA4Q9UI42 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 AC138696.2-201ENST00000607376 223 ntBASIC17.24■□□□□ 0.35
CPA4Q9UI42 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 PCDH8P1-201ENST00000428983 2773 ntBASIC17.24■□□□□ 0.35
CPA4Q9UI42 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 FAM90A7P-201ENST00000382628 1395 ntBASIC17.24■□□□□ 0.35
CPA4Q9UI42 FAM90A23P-201ENST00000400136 1395 ntBASIC17.24■□□□□ 0.35
CPA4Q9UI42 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.24■□□□□ 0.35
CPA4Q9UI42 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CPA4Q9UI42 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 AL360270.3-201ENST00000609118 1348 ntBASIC17.23■□□□□ 0.35
CPA4Q9UI42 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CPA4Q9UI42 AC020916.1-201ENST00000587762 1774 ntBASIC17.23■□□□□ 0.35
CPA4Q9UI42 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.23■□□□□ 0.35
CPA4Q9UI42 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 AC239868.1-201ENST00000369385 493 ntBASIC17.23■□□□□ 0.35
CPA4Q9UI42 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.23■□□□□ 0.35
CPA4Q9UI42 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.23■□□□□ 0.35
CPA4Q9UI42 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC17.23■□□□□ 0.35
CPA4Q9UI42 AC012441.2-201ENST00000444843 739 ntBASIC17.23■□□□□ 0.35
CPA4Q9UI42 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.23■□□□□ 0.35
CPA4Q9UI42 RN7SL67P-201ENST00000492147 296 ntBASIC17.23■□□□□ 0.35
CPA4Q9UI42 AC005962.1-201ENST00000584100 773 ntBASIC17.23■□□□□ 0.35
CPA4Q9UI42 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.23■□□□□ 0.35
CPA4Q9UI42 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.23■□□□□ 0.35
CPA4Q9UI42 AC242376.2-201ENST00000619355 883 ntBASIC17.23■□□□□ 0.35
CPA4Q9UI42 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.23■□□□□ 0.35
CPA4Q9UI42 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CPA4Q9UI42 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 AC136759.1-202ENST00000530858 2194 ntBASIC17.23■□□□□ 0.35
CPA4Q9UI42 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.23■□□□□ 0.35
CPA4Q9UI42 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.23■□□□□ 0.35
CPA4Q9UI42 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.23■□□□□ 0.35
CPA4Q9UI42 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 MTHFR-217ENST00000641820 1569 ntBASIC17.23■□□□□ 0.35
CPA4Q9UI42 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CPA4Q9UI42 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.22■□□□□ 0.35
CPA4Q9UI42 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPA4Q9UI42 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CPA4Q9UI42 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CPA4Q9UI42 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms