Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 OLR1-203ENST00000432556 950 ntTSL 2 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC20.34■□□□□ 0.85
NPC1L1Q9UHC9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPC1L1Q9UHC9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPC1L1Q9UHC9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
NPC1L1Q9UHC9 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC20.33■□□□□ 0.85
NPC1L1Q9UHC9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NPC1L1Q9UHC9 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 AC007292.2-201ENST00000593524 1812 ntBASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 AL590440.2-201ENST00000641973 1595 ntBASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 AL355994.2-201ENST00000447882 704 ntBASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 AL358472.3-201ENST00000608147 415 ntBASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPC1L1Q9UHC9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 YBX1P6-201ENST00000442962 1002 ntBASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 PPY2P-201ENST00000582808 702 ntBASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPC1L1Q9UHC9 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 TUBB1P2-201ENST00000422712 1306 ntBASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 TUBB1P1-201ENST00000503144 1300 ntBASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 AL583810.1-201ENST00000553344 1045 ntBASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 AC023824.1-201ENST00000562945 2975 ntBASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 HNRNPA1P48-202ENST00000565308 961 ntBASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 TECR-220ENST00000600083 1204 ntTSL 2 BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPC1L1Q9UHC9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 AC020910.5-201ENST00000623668 1865 ntBASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPC1L1Q9UHC9 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 463.7 ms