Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
FBXO28Q9NVF7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 AC005077.2-201ENST00000449786 690 ntBASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 AC044849.1-201ENST00000519737 1188 ntBASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 AC138028.6-201ENST00000616106 1482 ntBASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.47■□□□□ 0.39
FBXO28Q9NVF7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 AC020910.5-201ENST00000623668 1865 ntBASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 AC136621.1-201ENST00000624017 2304 ntBASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 AC020914.3-201ENST00000594712 304 ntBASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
FBXO28Q9NVF7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
FBXO28Q9NVF7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.46■□□□□ 0.38
FBXO28Q9NVF7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 AL136309.1-201ENST00000403917 691 ntBASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FBXO28Q9NVF7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms