Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 AC245100.5-201ENST00000452108 331 ntBASIC14.03□□□□□ -0.16
HMG20AQ9NP66 AC108751.1-201ENST00000490852 363 ntBASIC14.03□□□□□ -0.16
HMG20AQ9NP66 CXCL1P1-201ENST00000502804 216 ntBASIC14.03□□□□□ -0.16
HMG20AQ9NP66 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 MIR4751-201ENST00000578027 74 ntBASIC14.03□□□□□ -0.16
HMG20AQ9NP66 MIR7706-201ENST00000613747 67 ntBASIC14.03□□□□□ -0.16
HMG20AQ9NP66 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 AC127383.1-201ENST00000444697 1800 ntBASIC14.02□□□□□ -0.16
HMG20AQ9NP66 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMG20AQ9NP66 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 AL645939.2-201ENST00000427340 991 ntBASIC14.02□□□□□ -0.17
HMG20AQ9NP66 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 AC098831.1-202ENST00000438821 336 ntBASIC14.02□□□□□ -0.17
HMG20AQ9NP66 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 AC093909.1-201ENST00000504731 1122 ntBASIC14.02□□□□□ -0.17
HMG20AQ9NP66 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.02□□□□□ -0.17
HMG20AQ9NP66 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 AL049840.3-201ENST00000602669 611 ntBASIC14.02□□□□□ -0.17
HMG20AQ9NP66 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 AC131212.3-201ENST00000624087 4219 ntBASIC14.02□□□□□ -0.17
HMG20AQ9NP66 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 NUTM2HP-201ENST00000442076 2498 ntBASIC14.02□□□□□ -0.17
HMG20AQ9NP66 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMG20AQ9NP66 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms