Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 AC006328.1-201ENST00000437571 379 ntBASIC13.87□□□□□ -0.19
CHD8Q9HCK8 AC092896.1-201ENST00000465850 380 ntBASIC13.87□□□□□ -0.19
CHD8Q9HCK8 URB1-AS1-201ENST00000534991 831 ntBASIC13.87□□□□□ -0.19
CHD8Q9HCK8 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 AL356000.1-201ENST00000441073 1238 ntBASIC13.86□□□□□ -0.19
CHD8Q9HCK8 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 TPT1P6-201ENST00000458298 514 ntBASIC13.86□□□□□ -0.19
CHD8Q9HCK8 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 RN7SL121P-201ENST00000584223 273 ntBASIC13.86□□□□□ -0.19
CHD8Q9HCK8 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 AL359258.3-201ENST00000622910 2331 ntBASIC13.86□□□□□ -0.19
CHD8Q9HCK8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CHD8Q9HCK8 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 OR2A1-AS1-210ENST00000496968 531 ntBASIC13.85□□□□□ -0.19
CHD8Q9HCK8 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 AC133540.1-201ENST00000620845 1019 ntBASIC13.85□□□□□ -0.19
CHD8Q9HCK8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 CYP4F23P-201ENST00000593402 1579 ntBASIC13.85□□□□□ -0.19
CHD8Q9HCK8 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHD8Q9HCK8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms