Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HIPK3Q9H422 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HIPK3Q9H422 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.62■□□□□ 0.25
HIPK3Q9H422 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HIPK3Q9H422 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.62■□□□□ 0.25
HIPK3Q9H422 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.62■□□□□ 0.25
HIPK3Q9H422 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.62■□□□□ 0.25
HIPK3Q9H422 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.62■□□□□ 0.25
HIPK3Q9H422 AL353637.1-201ENST00000451571 732 ntBASIC16.62■□□□□ 0.25
HIPK3Q9H422 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.62■□□□□ 0.25
HIPK3Q9H422 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.62■□□□□ 0.25
HIPK3Q9H422 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.62■□□□□ 0.25
HIPK3Q9H422 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.62■□□□□ 0.25
HIPK3Q9H422 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.62■□□□□ 0.25
HIPK3Q9H422 RN7SL555P-201ENST00000584742 339 ntBASIC16.62■□□□□ 0.25
HIPK3Q9H422 AC005324.6-201ENST00000587972 613 ntBASIC16.62■□□□□ 0.25
HIPK3Q9H422 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.62■□□□□ 0.25
HIPK3Q9H422 AC090164.2-201ENST00000611487 516 ntBASIC16.62■□□□□ 0.25
HIPK3Q9H422 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.62■□□□□ 0.25
HIPK3Q9H422 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HIPK3Q9H422 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK3Q9H422 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 PUDPP3-201ENST00000445368 636 ntBASIC16.61■□□□□ 0.25
HIPK3Q9H422 AC104784.1-201ENST00000473096 294 ntBASIC16.61■□□□□ 0.25
HIPK3Q9H422 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 AC012044.1-201ENST00000603431 297 ntBASIC16.61■□□□□ 0.25
HIPK3Q9H422 AL358472.3-201ENST00000608147 415 ntBASIC16.61■□□□□ 0.25
HIPK3Q9H422 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.61■□□□□ 0.25
HIPK3Q9H422 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 AP000593.2-201ENST00000542775 1433 ntBASIC16.61■□□□□ 0.25
HIPK3Q9H422 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
HIPK3Q9H422 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK3Q9H422 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 LINC02199-201ENST00000506655 2702 ntBASIC16.6■□□□□ 0.25
HIPK3Q9H422 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HIPK3Q9H422 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK3Q9H422 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms