Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 NME2P1-201ENST00000426182 414 ntBASIC17.29■□□□□ 0.36
TNFRSF25Q93038 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 TDH-203ENST00000531764 1110 ntBASIC17.29■□□□□ 0.36
TNFRSF25Q93038 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 COX20P2-201ENST00000452636 358 ntBASIC17.28■□□□□ 0.36
TNFRSF25Q93038 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 KRT18P25-201ENST00000508931 1278 ntBASIC17.28■□□□□ 0.36
TNFRSF25Q93038 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 PTP4A1P2-201ENST00000546033 454 ntBASIC17.28■□□□□ 0.36
TNFRSF25Q93038 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 AC008735.3-201ENST00000596646 500 ntBASIC17.28■□□□□ 0.36
TNFRSF25Q93038 AC145423.3-201ENST00000615987 467 ntBASIC17.28■□□□□ 0.36
TNFRSF25Q93038 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 CU639417.3-201ENST00000624240 1404 ntBASIC17.28■□□□□ 0.36
TNFRSF25Q93038 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 LINC00552-201ENST00000625151 2579 ntBASIC17.28■□□□□ 0.36
TNFRSF25Q93038 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.28■□□□□ 0.36
TNFRSF25Q93038 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 AC092933.1-201ENST00000393644 945 ntBASIC17.27■□□□□ 0.36
TNFRSF25Q93038 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 AL512384.1-201ENST00000406683 331 ntBASIC17.27■□□□□ 0.36
TNFRSF25Q93038 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 AC007389.4-201ENST00000454674 793 ntBASIC17.27■□□□□ 0.36
TNFRSF25Q93038 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
TNFRSF25Q93038 AP002414.2-201ENST00000591780 3365 ntBASIC17.27■□□□□ 0.35
TNFRSF25Q93038 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF25Q93038 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF25Q93038 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF25Q93038 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TNFRSF25Q93038 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF25Q93038 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TNFRSF25Q93038 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF25Q93038 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF25Q93038 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.26■□□□□ 0.35
TNFRSF25Q93038 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms